Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3285 ATGTCTTTGACTCTGAGTCTCAGCATCACAACACTGTCTTTCCCACAACTCCGACGGTGTACCTTTACATCATCACCCATTCCTAGTTTCAAACTCAATTCTTCACCACTTTCCTTCCCTCGTGCTGCTTCTTCGTCTTTGGTTACCACTTCCTTAACTCAATTCACCGTCGGTGAAGATTTGCCGCAAAACTACGGAGAAGATTGGCTTCCCAAACCCGACCTTCATCTCCGCAGAAGAGCCGGTATTCTTCTCCATCCCACTTCGTTTCAAAGCCCCTACGGTATCGGCGATCTCGGAAACGAAGCCTTTCGTTTCATTGATTGGCTCCACCAAACCGGTTGCTCCCTTTGGCAGGTTCTTCCTCTCGTGCCTCCTGATGAAGGGGGATCTCCTTACGCAGGCCAGGATGCGAATTGTGGCAACACTCTTTTGATTTCTCTTGAAGAGCTTGTTGCGGATGGACTGTTAGAAAAACACGAGCTTCCCAAACCAATTGATGCAGAGCGCGTGAATTTTTCGGTTGTTGCTGATCTTAAGGATCCTTTGATAACTAAAGCTGCAGAAAGGCTCGTTTCAAGCAAAGGGGAACTCAAAAAACAGCTTGAGAATTTTCGTAGGGATCCTAACATATCAAGCTGGCTTGATGATGCAGCTTATTTTGCTGCTATTGACGACAGTTTGAACACACTCAGCTGGTACGATTGGCCCGAACCTTTAAAAAACCGCCATCTTGTAGCTTTAGAAGATATTTATGAACAAAAGCGAGATTTTATAAATGTATTTATTGCCCAACAGTTCTTGTTCCAAAGGCAATGGCAGAAAGTTCGCGACTATGCACAGAGTAGGGGAGTCAAGATAATGGGAGACATGCCCATTTATGTTGATTATCACAGTGCAGATGTTTGGGCAAATAAGAACCAGTTTGCACTGAACAGGAAAGGCTTTCCTCTTTTGGTGAGTGGTGTGCCTCCTGATGCATTCAGCGAAACTGGTCAGCTGTGGGGAAGCCCCCTGTATGATTGGAAAGCCATGGAGAAAGAAGGATACTCATGGTGGATACGCCGCATACGACGTGCGCAGGATATATATGACGAATTTAGGATTGACCACTTTAGAGGATTTGCTGGATATTGGGCTGTTCGCTCTGAAGCAAAAGTAGCTATGGGTGGAAAGTGGAAGGTAGGACCTGGAACATCTTTCTTTGATGCCATTTCCAGAGCTGTTGGAAGGATTAATATCACAGCAGAAGACTTGGGAGTTATCACTGAGGATGTAGTGCAACTAAGAAAATCCATTGGAGCTCCTGGAATGGCTGTCCTCCAGTTTGGGTTTGGAGGTGGTGCTGATAACCCTCATTTGCCTCATAATCACGAGTGCAATCAAGTTGTCTATACAGGGACTCATGACAATGACACAATTCAGGGTTGGTGGGAAGCTTTAAACCAAAAAGAGAAATCACATGTATTAAGTTATGTTTCATTAACCGGAGAAGATGATATTTCATGGGCACTAATCCAGACAGCGTTGGCCTCTGTTGCTCAAACAGCAATAATACCTATGCAAGATGTTCTTGGACTTGGGAGTTCTGCCAGGATGAATATTCCTGCAACTCGGTTTGGAAATTGGGGATGGAGGGTTCCAAGTTCTGTGAGCTTTGACAAGTTAGATAGAGAGGCAACCAGACTTAAAGAGATGCTTTCAATGTATGGCCGGCTTTGA 1722 0.4501 MSLTLSLSITTLSFPQLRRCTFTSSPIPSFKLNSSPLSFPRAASSSLVTTSLTQFTVGEDLPQNYGEDWLPKPDLHLRRRAGILLHPTSFQSPYGIGDLGNEAFRFIDWLHQTGCSLWQVLPLVPPDEGGSPYAGQDANCGNTLLISLEELVADGLLEKHELPKPIDAERVNFSVVADLKDPLITKAAERLVSSKGELKKQLENFRRDPNISSWLDDAAYFAAIDDSLNTLSWYDWPEPLKNRHLVALEDIYEQKRDFINVFIAQQFLFQRQWQKVRDYAQSRGVKIMGDMPIYVDYHSADVWANKNQFALNRKGFPLLVSGVPPDAFSETGQLWGSPLYDWKAMEKEGYSWWIRRIRRAQDIYDEFRIDHFRGFAGYWAVRSEAKVAMGGKWKVGPGTSFFDAISRAVGRINITAEDLGVITEDVVQLRKSIGAPGMAVLQFGFGGGADNPHLPHNHECNQVVYTGTHDNDTIQGWWEALNQKEKSHVLSYVSLTGEDDISWALIQTALASVAQTAIIPMQDVLGLGSSARMNIPATRFGNWGWRVPSSVSFDKLDREATRLKEMLSMYGRL* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3285 573 SUPERFAMILY (Trans)glycosidases 68 572 IPR017853 -
Mtr3g3285 573 PANTHER 4-ALPHA-GLUCANOTRANSFERASE DPE1, CHLOROPLASTIC/AMYLOPLASTIC 45 573 IPR003385 GO:0004134|GO:0005975
Mtr3g3285 573 Coils Coil 188 208 - -
Mtr3g3285 573 Pfam 4-alpha-glucanotransferase 85 548 IPR003385 GO:0004134|GO:0005975
Mtr3g3285 573 Gene3D Glycosidases 76 573 - -
Mtr3g3285 573 TIGRFAM malQ: 4-alpha-glucanotransferase 75 560 IPR003385 GO:0004134|GO:0005975
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3285 49 573 Glycoside Hydrolase AT5G64860 75.048 0.0 851
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3285 K00705 - gmx:100785271 944.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3285 3 46748309 46753913 Mtr3g3285 3 46748309 46753913 ECH