Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3269 ATGGTTGTTGAGGCAAAAGAATTATTTAATCGGATGGAGAAGCTTGGATGTGAACTTTCGATTGTGACCTTCAATGCGCTTATAAATGGACTGTGCAAAGCTAAAAATCTTGAGGAAGCAATGAATTTATTTTACAAGATGGACGTCGGGAGAAAATATTCGTTTCGCTTCAGTCTTTCTCAAGGTTCTTGTCAAGTTTCTGATGGTGCTAGTCTCCAGAAAAAGGTGAAGGAAATGTGTGAGGCGGGACAAATTTTGAAGGCTTACAAGTTAATCACTGATCATGCTGGCGACCTTAGGCTTGACATCATTTCATACAACATTCTAATCAATGCCTTTTGCTTGGATCGTGAATTTAATGCTGCTTATAATCTTTTTGAGGAACTGCAAAAGAAGGGTCTCTCACCCGATAGTGTTACATATGGGACAATTATCAAAGGGTTGTTCATAGTTGACAGAGAAGATGATGCCTTTAAGGTTTTTCAGCGTATGCAAAAGACTGGCTCTGAACCTACCCTCTCAGTTTATAGAACACTTATGACTTGTTTATGTAGAAAGAGCAAGGTCTCACGGGCATTCACTCTTTATTTGGAATATTTGAAGAGCCTTCCTAGTCGGGACAACGACTCAATCAGTACTCTAGAAAAATATTTATTCGGAGAAAAATTAGAACAAGTGATTCGAAGTTTACTTGAAGTGGACTTCAAGGCCAGAGATTTTAAATTAGTTCCATATACAATTCTACTTATTGGGTTATGTCAGGCAGGAAAAGTATCTGAAGCATTAATTATATTCTCTGTTCTTGATGAGTTCAATATCAAAATCAATGCTACAAGTTGTGTACATTTGATCAGAAGTCTTTGTAAGGAACAAAGGTGTCATACCCCAATTTTTGACTTAAGGTCCCACTGA 912 0.375 MVVEAKELFNRMEKLGCELSIVTFNALINGLCKAKNLEEAMNLFYKMDVGRKYSFRFSLSQGSCQVSDGASLQKKVKEMCEAGQILKAYKLITDHAGDLRLDIISYNILINAFCLDREFNAAYNLFEELQKKGLSPDSVTYGTIIKGLFIVDREDDAFKVFQRMQKTGSEPTLSVYRTLMTCLCRKSKVSRAFTLYLEYLKSLPSRDNDSISTLEKYLFGEKLEQVIRSLLEVDFKARDFKLVPYTILLIGLCQAGKVSEALIIFSVLDEFNIKINATSCVHLIRSLCKEQRCHTPIFDLRSH* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3269 303 Gene3D Tetratricopeptide repeat domain 204 295 IPR011990 GO:0005515
Mtr3g3269 303 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 20 50 IPR002885 -
Mtr3g3269 303 Pfam PPR repeat 244 270 IPR002885 -
Mtr3g3269 303 Pfam PPR repeat 175 198 IPR002885 -
Mtr3g3269 303 PANTHER ATPASE EXPRESSION PROTEIN 3 1 294 - -
Mtr3g3269 303 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 102 136 IPR002885 -
Mtr3g3269 303 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 1 294 - -
Mtr3g3269 303 Pfam PPR repeat 16 47 IPR002885 -
Mtr3g3269 303 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 137 171 IPR002885 -
Mtr3g3269 303 TIGRFAM PPR: pentatricopeptide repeat domain 139 172 IPR002885 -
Mtr3g3269 303 TIGRFAM PPR: pentatricopeptide repeat domain 104 138 IPR002885 -
Mtr3g3269 303 TIGRFAM PPR: pentatricopeptide repeat domain 22 47 IPR002885 -
Mtr3g3269 303 Pfam PPR repeat family 102 148 IPR002885 -
Mtr3g3269 303 Gene3D Tetratricopeptide repeat domain 61 203 IPR011990 GO:0005515
Mtr3g3269 303 Gene3D Tetratricopeptide repeat domain 1 60 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3269 Mtr-Chr3 46558061 46558972 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3269 4 290 Glycosyltransferase AT1G05670 25.939 5.07e-17 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3269 - - mtr:MTR_8g463610 405.216