Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3079 ATGGTGGATTCTTCAGACCGAATCCAAAACCCATGGATGGCTTCCGAACAACAAACTCCAATTCAAATTATCCAAAATCATAATAATCCTAAATCATCAACTATTGACAAATTAGGGATTGCTGAACGCGCTTTCTCCGCCGCCGGCGCCGCCTTTCTCTCCGCCGTCATTGTCAATCCCCTCGATGTTGCCAAGACAAGGTTGCAAGCACAAGCTGCAGGGGTTGCTTATTCTCATCCTCTCAGTAATCTCATCAGTAGAATGTCATGTTTTGGTCCAAATATGATGTTTGCTGATTTAAGATGTTCTCCATCATGTACTCGGGCTGGACTCCATGGAACAGTATCACTTTGTCCTCCCGATTGTTTTCGGTACAAAGGAACACTCGATGTTATTTGTAAAATTATACAACAGGAAGGCTTTACTAGGCTATGGAGGGGCACAAATGCTGGTCTGGCTCTTGCAGTACCAACTGTTGGAATTTACCTTCCTTGCTATGACATATTCCGGAACTGGTTCGAGGAATTCACAGCCAAAAGTGCTCCAACTGCAACACCATATGTACCTTTGGTGGCTGGTTCGTTGGCACGCTCACTGGCTTGTGCAACTTGTTATCCTATTGAACTTGCCCGAACTCGTATGCAGGCATTTAAAGAGACTCAAGTTGGCAAGAAGCCACCTGGAGTATTCCAGACTTTGGTAGGTGTTGTCTCCAATGGCAAGGGCACAAATATTCCATCGAACAGTTTGCAAAGTTATCGTGTCCTGTGGACTGGCATGGGTGCACAACTTGCCCGTGATGTACCATTCTCTGCGATTTGTTGGTCAACACTTGAGCCTACTAGAAGAAAACTTCTTAGTTTGGTCGGAGGAGACGATGCCGGTATATTGAGTGTTCTTGGCGCAAATTTTTCAGCTGGTTTTGTTGCAGGAACTCTAGCGGCTGGAGCTACATGTCCACTAGATGTTGCAAAAACTCGTAGGCAGATAGAGATGGATCATGTCAGAGCATTGAAAATGACCACGAGACAGACACTGATGGAGATCTGGAGAGATGGAGGTTTGAAAGGACTTTTTACCGGTTTTGGTCCGCGAGTTGGTCGAGCCGGCCCCTCTGTTGGAATTGTCGTTTCATTTTATGAAGTTGTAAAGTTTGTCCTAAATCACCGGCAAACAACATCATGA 1185 0.454 MVDSSDRIQNPWMASEQQTPIQIIQNHNNPKSSTIDKLGIAERAFSAAGAAFLSAVIVNPLDVAKTRLQAQAAGVAYSHPLSNLISRMSCFGPNMMFADLRCSPSCTRAGLHGTVSLCPPDCFRYKGTLDVICKIIQQEGFTRLWRGTNAGLALAVPTVGIYLPCYDIFRNWFEEFTAKSAPTATPYVPLVAGSLARSLACATCYPIELARTRMQAFKETQVGKKPPGVFQTLVGVVSNGKGTNIPSNSLQSYRVLWTGMGAQLARDVPFSAICWSTLEPTRRKLLSLVGGDDAGILSVLGANFSAGFVAGTLAAGATCPLDVAKTRRQIEMDHVRALKMTTRQTLMEIWRDGGLKGLFTGFGPRVGRAGPSVGIVVSFYEVVKFVLNHRQTTS* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3079 394 Pfam Mitochondrial carrier protein 186 285 IPR018108 -
Mtr3g3079 394 Pfam Mitochondrial carrier protein 38 174 IPR018108 -
Mtr3g3079 394 Pfam Mitochondrial carrier protein 302 389 IPR018108 -
Mtr3g3079 394 SUPERFAMILY Mitochondrial carrier 39 382 IPR023395 -
Mtr3g3079 394 ProSiteProfiles Solute carrier (Solcar) repeat profile. 184 284 IPR018108 -
Mtr3g3079 394 PANTHER BNACNNG35730D PROTEIN 26 393 - -
Mtr3g3079 394 PANTHER FI19922P1-RELATED 26 393 IPR045315 GO:1990542
Mtr3g3079 394 ProSiteProfiles Solute carrier (Solcar) repeat profile. 38 172 IPR018108 -
Mtr3g3079 394 Gene3D Mitochondrial carrier domain 107 394 IPR023395 -
Mtr3g3079 394 Gene3D Mitochondrial carrier domain 21 97 IPR023395 -
Mtr3g3079 394 ProSiteProfiles Solute carrier (Solcar) repeat profile. 298 386 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3079 Mtr-Chr3 44682224 44687053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3079 122 388 Organic Solute Cotransporters AT3G55640 26.374 8.54e-18 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3079 K15119 - gmx:100810960 651.358