Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mtr3g3073 | ATGGAGTACGAATACAATAGAAGCAGGTCGGGCCCACAAGTTCCGATGTACCGTGCTCCGCCTTCTATCTACCCTAAGATCGGCCCTCATCCCCATTCCGCCGCCCCTCGTCCCCCACCCTTTCAGCACCAAAACCCCAATCCTTCACCATCGAGATTGGGCATTAAGGTTGCCATCAAACCGGAATACAAGATCGCACCGCCGCCTCATTTGTTACCACATGTGGGAGATATTCCACGCAGCAACTTTCAATTTGATTTTGGATTGGAGAGGAAAATTTTGGCTGAAGCAGAGAAGGAGAACCCAAATTGGACCAAATTTGGGGTAGAAAATCTTCCAACCAAGGCTTCTGATTCATCACCGTCATCAAAGGTTACTACTGCAGATCCAATTGTGAACAAATATATAGCCATGGGACTCAGCCGAGACGTAGTTCCTATTGCTGTTAAGAATTATGGTGATAATCCTACCAAAGTTCAAGAATTTGTCAAGGGATACACCCTTCTGCATGAAATGGGATTTTCATCAAACAGTGTTGATGAAGCCTTGCTTATGTATGACAATGATACAGACAAGGCATTGGCATATTTCCTTAATGGCTCATCATGA | 609 | 0.4516 | MEYEYNRSRSGPQVPMYRAPPSIYPKIGPHPHSAAPRPPPFQHQNPNPSPSRLGIKVAIKPEYKIAPPPHLLPHVGDIPRSNFQFDFGLERKILAEAEKENPNWTKFGVENLPTKASDSSPSSKVTTADPIVNKYIAMGLSRDVVPIAVKNYGDNPTKVQEFVKGYTLLHEMGFSSNSVDEALLMYDNDTDKALAYFLNGSS* | 203 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mtr3g3073 | 202 | ProSiteProfiles | Ubiquitin-associated domain (UBA) profile. | 158 | 200 | IPR015940 | - | |
| Mtr3g3073 | 202 | Gene3D | UBAP1 SOUBA domain | 122 | 201 | IPR042575 | - | |
| Mtr3g3073 | 202 | PANTHER | - | 13 | 202 | - | - | |
| Mtr3g3073 | 202 | MobiDBLite | consensus disorder prediction | 18 | 46 | - | - | |
| Mtr3g3073 | 202 | MobiDBLite | consensus disorder prediction | 1 | 53 | - | - | |
| Mtr3g3073 | 202 | PANTHER | LD44032P | 13 | 202 | IPR038870 | GO:0000813|GO:0043130|GO:0043162 | |
| Mtr3g3073 | 202 | CDD | UBA2_UBAP1_like | 162 | 198 | - | - | |
| Mtr3g3073 | 202 | SUPERFAMILY | UBA-like | 158 | 200 | IPR009060 | GO:0005515 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mtr3g3073 | - | - | cam:101496118 | 315.849 |