Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3072 ATGCAGAGCAAGGGATCGAGTCACAGACTCTCCACTATGGCGAATCGATCTCGAATCCCTGCACTCTTCATCTCCATGTTTGCCACTTTCGCTTCTATCTACGTCGCCGGAAGGTTATGGCAAGACGCACAAAATCGCGTTTATCTCATCAAAGAGCTTGATAGAATCACTGGCCAGGGGCAATCTGCTATATCAGTGGACGATACATTGAAGATCATAGCCTGCAGGGAACAACATAAGAAGCTTGATGCGCTAGAGATGGAACTTGCTGCAGCTAAACAAGAGGGTTTTGTTTCAAAGGGATTGATTGAGACCAATGGGACTTACTCTAAGAGACGACCCTTGGTAGTCATAGGTATACTCACAAAGTTTGGGCGAAGGAAGAATAGAGATGCCATTCGTAAAGCTTGGATGGGAAGTGGTGCAGCTTTAAAGAAAATAGAAGATGGAAAGGGCATTATTGTGCGGTTTGTTATTGGTAGAAGTCCAAATCGTGGAGACAGTCAGGATAAAGACATTGATCGTGAGAATAGGTTGACGAATGACTTCCTAATTCTAGATGATCACGTAGAAGGAAGCCAGGGACACCCAGAGAAGGCTAAATTGTTTTTTGCTCACGCTGCAGACGAATGGGATGCGGAGTTTTATGCTAAAGTCAATGATGATGTTTATGTAAATATTGATGCCTTGGGTGCTACGCTTGCAACTCATTTGGACAAACCTCGTCTTTACATGGGGTGCATGAAATCAGGCGAAGTTTTCTCCGAACAGAACCACAAATGGTATGAACCAGAATGGTGGAAGTTTGGTGACAAAAAATCATATTTTCGTCATGCATCAGGAGAGATGTATGTCATATCTCGAGCTTTGGCTAAATTCATATCAATAAACAGATCTATTCTTCGTACCTATGCCCATGATGATGTGAGCGCTGGATCCTGGTTTATTGGACTTGATGTGAAGCATGTTGATGAGGCAAAGTTTTGTTGCTCGTCTTGGTCGACAGGAGCAATTTGTGCGGGTGTTTGA 1029 0.4354 MQSKGSSHRLSTMANRSRIPALFISMFATFASIYVAGRLWQDAQNRVYLIKELDRITGQGQSAISVDDTLKIIACREQHKKLDALEMELAAAKQEGFVSKGLIETNGTYSKRRPLVVIGILTKFGRRKNRDAIRKAWMGSGAALKKIEDGKGIIVRFVIGRSPNRGDSQDKDIDRENRLTNDFLILDDHVEGSQGHPEKAKLFFAHAADEWDAEFYAKVNDDVYVNIDALGATLATHLDKPRLYMGCMKSGEVFSEQNHKWYEPEWWKFGDKKSYFRHASGEMYVISRALAKFISINRSILRTYAHDDVSAGSWFIGLDVKHVDEAKFCCSSWSTGAICAGV* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3072 342 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 1 336 IPR002659 GO:0006486|GO:0016020|GO:0016758
Mtr3g3072 342 Coils Coil 75 95 - -
Mtr3g3072 342 Gene3D - 110 334 - -
Mtr3g3072 342 Pfam Domain of unknown function (DUF4094) 18 94 IPR025298 -
Mtr3g3072 342 Pfam Galactosyltransferase 129 324 IPR002659 GO:0006486|GO:0016020|GO:0016758
Mtr3g3072 342 PANTHER HYDROXYPROLINE O-GALACTOSYLTRANSFERASE HPGT1 1 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3072 Mtr-Chr3 44569054 44575911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3072 22 342 Glycosyltransferase AT5G53340 72.586 4.78e-180 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3072 K20854 - gmx:100779561 635.565