Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3064 ATGCCACCAAAATTAGAGTCAGAGAAGAATCCTGTAAGATATATGCATACAGTTTCAGAAGCAGGTCGACTTCTCCCTTCATCAAGCCGCTGGAACGCCATAGCACTTGATTTCAACCTTACTCCAAAGTTTTCTGCTTCTTATGAGTCCATCCCTTCCCAATATCCAAAATCTGTTGACTGCAATCTGGTCATCACTGATAAGAAATACTTCCATATTTTTATTTTTGTTATAGTAGCAATATTTTTTGCAGTTGTAGCAGTGGCTCTTCTGGTGCACTTTTTACCTCAAAAGCATAAACATCAAGACTCGTCTATCGATCTCAAGTTGGCAATAAATCAAGCTCTAACATTTTATGACGCACAAAAATCTGGGAACTATCCACGGAATAGTCCAGTGAAATATAGGGGAGACTCTGGATTAAAAGATGGGAATTCAGCAAAGACCAATCTTATTGGTGGATATTATGATTCAGGCAACAACATTAAGTTTACTTTCACCACAGCTTATACTATGACCTTGTTGAGTTGGACTGCAATGGAATATCAAAGTAAATATGCTGATATTGATGAGCTTGACCATGTTAGGGATATTATCAGATGGGGTACTGACTATTTGCACAAGGTGTTCATTCCTCCAAATGGATCCAACCTAACACTATATTCCCAGGTTGGAAGTACCATTAGTACTAATCATGAACCAAATGATATAAGCTGCTGGCAAAGACCTGAAGACATGAGTTATGGGAGACCAGTTTCAGTTTGTGATGGATCTGCTACAGATTTAGCTGGTGAAATTGTGGCAGCACTATCTGCGGCGTCAATGGTATTCAAAGAAGACAAAGAATACTCAGGGAAACTAGTTCAAGCAGCAGAAAGCCTATATGAGGTAGTTACAAAGGAAGACCCTAAGAAGCAAGGAACCTACACCGCTGTTGATGCATGTGGAAAACAAGCAAGAATGCTTTATAACTCAACTAGTTACAAAGATGAGTTGGCTTGGGGAGCTACTTGGTTGTTTCTTGCTACTAAAAACACTGATTATCTTGCAAATGCAACTCAATTTTTTTTATCAGCAAAGAAAGATGAAACAAATTTAGACAAAGGGGTGTTTTATTGGAATAACAAGCTCAGTGCTGTTGCGGTTTTGCTTACTGGTATTCGATATTTCCGTGATCCCGGGTTTCCATATGAAGATGTTTTGAAATTTTCATCGAATTCCACTCACTCCCTCATGTGTTCTTACCTTTTCAAAAAGTATATGAGCAGGACACCTGGTGGATTGGTTATTCCAAAACCTGATAATGGACCATTACTCCAGTATGCTGTAACAGCATCTTTTCTCAGTAAATTGTATAGTGATTACATTGATCATCTCAAAATATCCGGTGCAAGCTGTGAAACCGATACATTCTCAGTTTCAATGCTTCGTGATTTTTCAAGCTCTCAGGTTAACTACATCTTGGGACAAAATCCAATGAAAATGAGTTATTTAGTGGGATATGGTGATAAGTTTCCAGTCCAAGTTCATCATAGAAGTGCGTCGATCCCTTGGGATAAACGGCTCTACAATTGTGATGATGGTAAGACATGGCTGAACTCGAAAAATCCGAACCCACAAGTTCTTTTGGGAGCCATGGTAGGAGGACCAGACACAAATGATCATTTTACTGATCAGAGGAGCAACAAAAGGTTCACGGAGCCAACCATATCAAGCAATGCTGGATTAGTTTCAGCATTGATTGCACTTCAAGACCCTTCTAATAATTCACATGACTTGAAAAACTCATTGTGGGAATGGATTTGA 1806 0.3904 MPPKLESEKNPVRYMHTVSEAGRLLPSSSRWNAIALDFNLTPKFSASYESIPSQYPKSVDCNLVITDKKYFHIFIFVIVAIFFAVVAVALLVHFLPQKHKHQDSSIDLKLAINQALTFYDAQKSGNYPRNSPVKYRGDSGLKDGNSAKTNLIGGYYDSGNNIKFTFTTAYTMTLLSWTAMEYQSKYADIDELDHVRDIIRWGTDYLHKVFIPPNGSNLTLYSQVGSTISTNHEPNDISCWQRPEDMSYGRPVSVCDGSATDLAGEIVAALSAASMVFKEDKEYSGKLVQAAESLYEVVTKEDPKKQGTYTAVDACGKQARMLYNSTSYKDELAWGATWLFLATKNTDYLANATQFFLSAKKDETNLDKGVFYWNNKLSAVAVLLTGIRYFRDPGFPYEDVLKFSSNSTHSLMCSYLFKKYMSRTPGGLVIPKPDNGPLLQYAVTASFLSKLYSDYIDHLKISGASCETDTFSVSMLRDFSSSQVNYILGQNPMKMSYLVGYGDKFPVQVHHRSASIPWDKRLYNCDDGKTWLNSKNPNPQVLLGAMVGGPDTNDHFTDQRSNKRFTEPTISSNAGLVSALIALQDPSNNSHDLKNSLWEWI* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3064 601 PANTHER ENDO-1,4-BETA-GLUCANASE 23 596 - -
Mtr3g3064 601 Gene3D - 105 586 IPR012341 GO:0005975
Mtr3g3064 601 PANTHER ENDOGLUCANASE 23 596 - -
Mtr3g3064 601 SUPERFAMILY Six-hairpin glycosidases 107 585 IPR008928 GO:0005975
Mtr3g3064 601 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 486 512 IPR018221 -
Mtr3g3064 601 Pfam Glycosyl hydrolase family 9 111 580 IPR001701 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3064 Mtr-Chr3 44486890 44490012 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3064 57 583 Glycoside Hydrolase AT5G49720 45.203 1.26e-143 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3064 K01179 - gmx:100805472 976.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3064 3 44486890 44490012 Mtr3g3064 3 44486890 44490012 ECH