Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3056 ATGGATTTGATTAAATCTTCAACCGTTCAACCGCGGCGAATTCCTCCATCATCGCCACTTCCCACCATTACTAGGTCTATGAATTGCTTCTATGTTCCTTCTACTTCTCGCTCTACAACCAAATTCTCTTCTCAGTTTTGTACTCTTCCACATACTCCAATAAAGCCCCTTGTTATTCTTCATGTCAAGAACAAAAATTCTGATTTTGAACCCTTTCTAGAACCTACCATTGCTCAAGAAATATCAGAAGACGAAGAAGTAGAAGTAGAAGAAGAAGAAGATGTTGATGATGTTGAATTTGAAGACGAGACCGAAATGGATGAGGATAGCGTCGAGTTCTATGACGAAGAAGAGGAGGATAGTGTGCCCTATGCAGGTGATGGCGGTGCGGGTGGTGGAATTTCCCTTGCCGGAACATGGTGGGATAAAAAAGCATTAGCAATTGCTAAAGAGGTTACTATGTCTTTTGATGGTGACTTGCAAATTTATGCTTTTAAAACTTTGGTTAATTCCACCATTCAAGTGCGCATTGAGAAGCTTTCAAACAAATCTGGATCTCCCACCATGGAAGATATTGAAGCCTTTTCTACAGCTTACAGAGCAAAATTGGATGAAGCAGAACTTGCCAAATTCGTTCCTGAGAATTTAAGTTTGGAGGTGTCGTCTCCAGGTGTTGAAAGAATCGTTCGGATTCCAGATGACCTAGACCGATTCAAGGAGAGAGCTATGTATGTGAAATATGTCATTGATGACGATGCAAATAATCCACCTGCAGAAGGTGAGGGTGTTTTCAAGCTTGAATCCTTCGACATGGTAACAGAATATTGCACCTGGAGTTTAGCAAACGTGAGAGTCAACAGAGAGAAAGCAGGGAAAGGAAGACCGCTGAATAAAAAGCAAAGAGAATGGCGTTTAAGTACTCCCTTCGATTCGTTACTTTTTGTACGGTTACAATCAGACATTTAA 966 0.4099 MDLIKSSTVQPRRIPPSSPLPTITRSMNCFYVPSTSRSTTKFSSQFCTLPHTPIKPLVILHVKNKNSDFEPFLEPTIAQEISEDEEVEVEEEEDVDDVEFEDETEMDEDSVEFYDEEEEDSVPYAGDGGAGGGISLAGTWWDKKALAIAKEVTMSFDGDLQIYAFKTLVNSTIQVRIEKLSNKSGSPTMEDIEAFSTAYRAKLDEAELAKFVPENLSLEVSSPGVERIVRIPDDLDRFKERAMYVKYVIDDDANNPPAEGEGVFKLESFDMVTEYCTWSLANVRVNREKAGKGRPLNKKQREWRLSTPFDSLLFVRLQSDI* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3056 321 Gene3D - 147 223 IPR035956 -
Mtr3g3056 321 MobiDBLite consensus disorder prediction 84 128 - -
Mtr3g3056 321 MobiDBLite consensus disorder prediction 1 20 - -
Mtr3g3056 321 Hamap Ribosome maturation factor RimP [rimP]. 143 321 IPR003728 GO:0042274
Mtr3g3056 321 SUPERFAMILY YhbC-like, N-terminal domain 169 226 IPR035956 -
Mtr3g3056 321 Pfam RimP N-terminal domain 167 226 IPR028989 -
Mtr3g3056 321 PANTHER OSJNBA0006B20.18 PROTEIN 1 321 - -
Mtr3g3056 321 MobiDBLite consensus disorder prediction 84 123 - -
Mtr3g3056 321 PANTHER OSJNBA0006B20.18 PROTEIN 1 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3056 Mtr-Chr3 44417966 44421370 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3056 - - gmx:100783320 369.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3056 3 44417966 44421370 Mtr3g3056 3 44417966 44421370 ECH