Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3054 ATGCAGTTAACGGGTTTGTTCAGTTTTGATATATGGGATAGTAGGTTGGTTACTCAATCAATACAGTTAATGGGTATGCTCAGTTTCTGGATTTCATTTACAAAGTTTAGAACTTTAATCTCAAGGGTTTTTGGTTTTATTCACAAAATTATGAAGGGTAATTGCAATGCTTGGATCTTAGTTTCTTTCAATGTGTTAGTCACAACTGGGTCTTTGATTTCCTTCATGTTAGTACTTTCATGGGTTTATTCATATGCATTTCCCACTCCTAATTCAGTGATTAAGAGTTATGATGAGATTAATCCTAACACTAATAGTAATAGTTCTCATTTACATGCTCAGAGCTATGTTGAGGCTCTAAAATCCAACGTTTCAAGGGATGCATGTAATGTGTTTGATGGAAGTTGGATTCAGGAAGGTAGTTATAGTTATAGTTACCCTTTATATGATGCTTCACAATGTCCATTTGCAGAAAAAGGTTTTAATTGTTTTGCGAATGGGCGTAAAGATAGAGGTTACACAAAATGGAGATGGAAACCTAAGAACTGTGATATTCCAAGGTTTGATGCACGTAGAATACTCGAAAATCTTCGTGGGAAAAGAGTGGTTTTTGTTGGTGATTCATTGAGTAGGACTCAATGGGAGTCTTTGATATGTATGTTAATGACAGGTGTTGAGAATAAGAAGAGTGTTTATGAAATCAAAGGCAATAAGATCACCAAACAGATTAGGTTTCTAGGTGTAAGGTTTAGTTCTTTTGATGTTAGAATCGATTTTTATCGTTCTGTTTTTCTGGTGAAGCCTGGTTCGGTGCCTAGATTTGCGCCTAAAAGAGTGAAGACGACACTGAAATTGGACAAGATAGATGATATTAGCCATGAATGGGTTGATTCTGATGTTCTTATATTCAATTCAGGTCACTGGTGGACAAGGACTAAGCTTTTTGATATGGGCTGGTATTTTCAGGTTGGTAGCTCACTGAAGCTTGGAATGCCAATTAATTCAGCTTTCAAAACAGCTTTGCTCACCTGGGCATCTTGGGTAGATAATACAGTTAACACAAACAGGACAAGAGTATTCTTCCGAACTTTCGAATCATCGCATTGGAGTGGACATAACCATAATGCTTGCAAAGTGACTAAAAGGCCTTGGAAGAGAACTATAGGCAAGGACAAAAGTCCAATTTCAGATATGATCAAAAGAGTTGTGAAAGATATGAGTGCTCCTGTGACGGTGCTGCACGTGACACCGATGGATGCATATAGGAGTGATGGCCATGTGGGAACTTGGAGTGACAAACCATCTGTACCTGATTGCAGTCATTGGTGTTTACCTGGTGTTCCTGATATGTGGAATGAAATTCTCTTCTCATACTTGCTACAAAAAGATGAAGCAAGTTAA 1401 0.3769 MQLTGLFSFDIWDSRLVTQSIQLMGMLSFWISFTKFRTLISRVFGFIHKIMKGNCNAWILVSFNVLVTTGSLISFMLVLSWVYSYAFPTPNSVIKSYDEINPNTNSNSSHLHAQSYVEALKSNVSRDACNVFDGSWIQEGSYSYSYPLYDASQCPFAEKGFNCFANGRKDRGYTKWRWKPKNCDIPRFDARRILENLRGKRVVFVGDSLSRTQWESLICMLMTGVENKKSVYEIKGNKITKQIRFLGVRFSSFDVRIDFYRSVFLVKPGSVPRFAPKRVKTTLKLDKIDDISHEWVDSDVLIFNSGHWWTRTKLFDMGWYFQVGSSLKLGMPINSAFKTALLTWASWVDNTVNTNRTRVFFRTFESSHWSGHNHNACKVTKRPWKRTIGKDKSPISDMIKRVVKDMSAPVTVLHVTPMDAYRSDGHVGTWSDKPSVPDCSHWCLPGVPDMWNEILFSYLLQKDEAS* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3054 466 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 185 457 IPR026057 GO:0016740
Mtr3g3054 466 Pfam PMR5 N terminal Domain 128 184 IPR025846 -
Mtr3g3054 466 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 55 460 IPR029962 GO:0016413
Mtr3g3054 466 PANTHER LEAF SENESCENCE RELATED PROTEIN-LIKE 55 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3054 Mtr-Chr3 44404137 44406904 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3054 - - var:108329943 766.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3054 3 44404137 44406904 Mtr3g3054 3 44404137 44406904 ECH