Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3051 ATGACGATGGCAACGATATGCACCCATGCATGGCCTCCACTACAATGTTATCAAAAGGCCCCATCCAAAACATTCATAAAACCCCAAAAGACACACTCAATGTCTCCTGAAAAGAAAGAAGTCTTCAAATCACTAGAGAAATGGGTTTCACAAAGTGTGTTGCCACTGGTCAAACCAGTTGAGGAGAGTTGGCAACCCCATGACCTATTGCCAGACTCATCACTGCCGTCGGATGAGTTCATCGATCAAGTGAAGGCCTTAAGGGATCGAACAAATGAGCTTCCAGACGATTATCTCGTGGTTTTGGTGGGTGGCATGATCACCGAGGAAGCATTGCCTACGTACCAAACATGGATAAACAAGTTGGATGGAGTTGGAGACGAATCTGGTTCAAGTCTCTCACCATGGGCTATATGGTCACGCTCTTGGACCGCTGAAGAAAATAGACATGGAGATTTACTCAAAACTTATCTCTATCTCTCCGGTCGAGTTGATATGTGCATGATTGAGAAGACTATCCAATGTTTGATTGGATCTGGCATGGATGTGGGTACCGAAAACAACCCATACATGGGTTTTGTGTATACATCTTTTCAAGAGCGAGCCACATTTGTGTCACACGGCAACCTAGGTAGGTTGGCTAAAGAGAGAGGTGACCTCTTACTTGCACGTGTATGTGGGACAATTGCCGCTGATGAGAAGCGCCACGAGCATGCATATGTGAGGATTGTGGAAAAGCTTCTAGAAGTGGATCCCACCGAGGCTATGGTGGCCATAGCCAAAATGATGCAACACAAGATTACAATGCCCGCTCACTTGATGCATGATGGACAAGACACACGCTTCTTCGATCATTTTTCTGCGGTGACGCGACGTATTGGCGTGTACACAACCAAAGATTACATTGATATCTTAGAGTTCTTGATTAGACGATGGAGATTGGAGAAGCTTGAGGGTTTGACAATTGAAGGACAACATGCACAAGAGTTCGTGTGTGGACTTGCACCTAGATTAAGGAAACTCGACGAGCGTCTTGATGAGAGAACAAGCAAGATCAACAACAAATTTACTTGGATCTTCAATAAAGAGTTATCCTTGTGA 1101 0.4487 MTMATICTHAWPPLQCYQKAPSKTFIKPQKTHSMSPEKKEVFKSLEKWVSQSVLPLVKPVEESWQPHDLLPDSSLPSDEFIDQVKALRDRTNELPDDYLVVLVGGMITEEALPTYQTWINKLDGVGDESGSSLSPWAIWSRSWTAEENRHGDLLKTYLYLSGRVDMCMIEKTIQCLIGSGMDVGTENNPYMGFVYTSFQERATFVSHGNLGRLAKERGDLLLARVCGTIAADEKRHEHAYVRIVEKLLEVDPTEAMVAIAKMMQHKITMPAHLMHDGQDTRFFDHFSAVTRRIGVYTTKDYIDILEFLIRRWRLEKLEGLTIEGQHAQEFVCGLAPRLRKLDERLDERTSKINNKFTWIFNKELSL* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3051 366 ProSitePatterns Fatty acid desaturases family 2 signature. 287 306 IPR005803 GO:0006633|GO:0016491
Mtr3g3051 366 PANTHER ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED 12 366 IPR005067 GO:0006631|GO:0045300
Mtr3g3051 366 Pfam Fatty acid desaturase 37 360 IPR005067 GO:0006631|GO:0045300
Mtr3g3051 366 PANTHER STEAROYL-[ACYL-CARRIER-PROTEIN] 9-DESATURASE 6, CHLOROPLASTIC 12 366 - -
Mtr3g3051 366 Coils Coil 361 366 - -
Mtr3g3051 366 CDD Acyl_ACP_Desat 37 344 IPR005067 GO:0006631|GO:0045300
Mtr3g3051 366 SUPERFAMILY Ferritin-like 25 363 IPR009078 -
Mtr3g3051 366 PIRSF Dlt9_acylACP_des 5 366 IPR005067 GO:0006631|GO:0045300
Mtr3g3051 366 Gene3D Ribonucleotide Reductase, subunit A 21 366 IPR012348 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3051 Mtr-Chr3 44372069 44374049 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3051 20 366 Acyl Lipid Metabolism Gene Families AT1G43800 68.182 0.0 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3051 K03921 - egr:104449632 518.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3051 3 44372069 44374049 Mtr3g3051 3 44372069 44374049 ECH