Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3041 ATGCATGTTGCACATCTTTTGTTTGGCATATTTGGGAATGCTTCTGCTTTGTTCCTCTTCTTGGCACCTGTGATTACATTCAAGAGGATTATAGTCAACAAATCCACAGAGAAATTTTCAGGCTTACCATATGTTATGACTCTGCTCAATTGTCTCCTTTCTGCTTGGTACGGTCTGCCTTTTGTGTCTCCCAACAACATACCGGTAACAACAGTAAATGGCACCGGAGCAGGGATTGAAATCATATATGTTTTGATATTCATCATATTTGCACCTAAGAAGGAAAAAATCAAAATCTTTGCCCTATTCACCTTGGTACTGTCTGTGTTCTCTGCTGTTGTTTTTGTCTCCCTCTTTGCCTTCCATGGCAATCATAGGAAGGCCTTCTGCGGCTTTGCCATGGCTATATTTTCCGTCATCATGTATGGTTCTCCACTCTCAATTATGAGATTAGTGATCAAAACCAAGAGTGTGGAGTTCATGCCATTCTTCTTGTCGCTGTTTGTGTTTCTTTGCGGCAGTTCATGGTTTATATTCGGTCTGCTAGGCCGTGACCTATTTGTTGCTGTACCTAATGGTCTTGGTTCTGTTTTGGGGACAATGCAACTAATATTGTATTTCATATACCGTGACAACAAAGGTAGTCCAAAACAGCAGGAACCAACAGAAGGGGAATCAATGGAGATGGGTAATGGAAAAAACCATCAAATGAAACAGTCTTATGAAAATGAAATTCAAGGATGA 744 0.4046 MHVAHLLFGIFGNASALFLFLAPVITFKRIIVNKSTEKFSGLPYVMTLLNCLLSAWYGLPFVSPNNIPVTTVNGTGAGIEIIYVLIFIIFAPKKEKIKIFALFTLVLSVFSAVVFVSLFAFHGNHRKAFCGFAMAIFSVIMYGSPLSIMRLVIKTKSVEFMPFFLSLFVFLCGSSWFIFGLLGRDLFVAVPNGLGSVLGTMQLILYFIYRDNKGSPKQQEPTEGESMEMGNGKNHQMKQSYENEIQG* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3041 247 Gene3D - 126 221 - -
Mtr3g3041 247 Pfam Sugar efflux transporter for intercellular exchange 130 213 IPR004316 GO:0016021
Mtr3g3041 247 Pfam Sugar efflux transporter for intercellular exchange 7 94 IPR004316 GO:0016021
Mtr3g3041 247 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 241 IPR018180 GO:0051119
Mtr3g3041 247 PANTHER RAG1-ACTIVATING PROTEIN 1 4 241 - -
Mtr3g3041 247 Gene3D - 9 104 - -
Mtr3g3041 247 MobiDBLite consensus disorder prediction 232 247 - -
Mtr3g3041 247 MobiDBLite consensus disorder prediction 214 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3041 Mtr-Chr3 44283843 44286572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3041 1 190 Miscellaneous Gene Families AT1G21460 74.737 3.47e-102 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3041 K15382 - gmx:100800304 387.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3041 3 44283843 44286572 Mtr3g3041 3 44283843 44286572 ECH
Mtr1g0854 1 9674845 9677431 Mtr3g3041 3 44283843 44286572 PCT