Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3037 ATGGCTTTGGAGAATTGTTTAAGAGTATCCACAGCCAGACCTCAGTGTCTTCCTTCATTGTTTCCAACTTCAAGGGAAAAGGTTGTTTTCTCAGCTCAAAGAGCAGGATTCAAGAAATCTGTGCTGAACTCAACACTATCATTCCCATCTGGTGTTGCCTACAGAAAATCTCGTTTTATTTGCAATGCTCGTGAAGCTGTAAATGAAGTTGGAGCAGTGACTGACTCAAGCTGGAATGAGCTTGTTCTTGCAAGTGACACCCCTGTGCTGGTAGATTTTTGGGCACCATGGTGTGGTCCATGCAGGATGATAGCGCCTATTATTGATGAGCTAGCCAAAGAATATGCTGGGAAAATTTCGTGCTACAAGCTCAACACAGATGAGAATCCAAACATAGCAACAAAGTACGGCATCAGAAGCATTCCAACTGTTCTATTTTTCAAGAATGGAGAGAAAAAAGAAAGTGTAATTGGTGCAGTTCCAAAGTCTACTCTGTCTACAACTGTGGAAAAATATATTGATGCATGA 528 0.4148 MALENCLRVSTARPQCLPSLFPTSREKVVFSAQRAGFKKSVLNSTLSFPSGVAYRKSRFICNAREAVNEVGAVTDSSWNELVLASDTPVLVDFWAPWCGPCRMIAPIIDELAKEYAGKISCYKLNTDENPNIATKYGIRSIPTVLFFKNGEKKESVIGAVPKSTLSTTVEKYIDA* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3037 175 PANTHER GEO12009P1 50 173 - -
Mtr3g3037 175 PRINTS Thioredoxin family signature 89 97 - -
Mtr3g3037 175 PRINTS Thioredoxin family signature 97 106 - -
Mtr3g3037 175 PRINTS Thioredoxin family signature 137 148 - -
Mtr3g3037 175 ProSitePatterns Thioredoxin family active site. 90 108 IPR017937 -
Mtr3g3037 175 CDD TRX_family 76 170 - -
Mtr3g3037 175 PANTHER THIOREDOXIN M-TYPE PROTEIN 50 173 - -
Mtr3g3037 175 SUPERFAMILY Thioredoxin-like 58 174 IPR036249 -
Mtr3g3037 175 Pfam Thioredoxin 71 170 IPR013766 -
Mtr3g3037 175 ProSiteProfiles Thioredoxin domain profile. 61 175 IPR013766 -
Mtr3g3037 175 Gene3D Glutaredoxin 70 174 - -
Mtr3g3037 175 TIGRFAM thioredoxin: thioredoxin 74 172 IPR005746 GO:0015035
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3037 Mtr-Chr3 44229930 44231679 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3037 K03671 - gmx:100305596 285.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3037 3 44229930 44231679 Mtr3g3037 3 44229930 44231679 ECH