Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3032 ATGTCTAAGGGAAGAGGCAGTGCAGCTATGAACATGGTCATTGTGATTTCACTGCTGTGCCTTATGGTTCTGGCAAAAAGTACTAACGCAGAAACTTACACCGTTGGAGGACCTAAGGGATGGACCTTCGGCATTAAGAAGTGGCCTAATGGAAAATCGTTTGTTGCTGGTGATGTGCTTGATTTTGGCTATAATCCAAAGATGCACAATGTGGTTTTGGTGGACCAAACTGGATACGACAAATGCAAGACACCAGAAGGTTCTAAAGTGTTCAGAACAGGGAGTGACCAAATCGAGCTAGTAAAGGGAGACAACTACTTCATATGCAACCTTCCAGGTCACTGCCAATCTGGGATGAAGATTTACATCAATGCAGCTTAG 381 0.4409 MSKGRGSAAMNMVIVISLLCLMVLAKSTNAETYTVGGPKGWTFGIKKWPNGKSFVAGDVLDFGYNPKMHNVVLVDQTGYDKCKTPEGSKVFRTGSDQIELVKGDNYFICNLPGHCQSGMKIYINAA* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3032 126 ProSitePatterns Type-1 copper (blue) proteins signature. 103 119 IPR028871 -
Mtr3g3032 126 Pfam Plastocyanin-like domain 41 119 IPR003245 GO:0009055
Mtr3g3032 126 Gene3D - 31 125 IPR008972 -
Mtr3g3032 126 PANTHER BLUE COPPER PROTEIN 16 124 IPR039391 GO:0009055
Mtr3g3032 126 CDD Plantacyanin 32 125 IPR041844 -
Mtr3g3032 126 ProSiteProfiles Phytocyanin domain profile. 31 126 IPR003245 GO:0009055
Mtr3g3032 126 PANTHER BASIC BLUE-LIKE PROTEIN 16 124 - -
Mtr3g3032 126 SUPERFAMILY Cupredoxins 32 125 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3032 Mtr-Chr3 44195060 44196205 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3032 10 121 Miscellaneous Gene Families AT5G26330 38.462 4.48e-25 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3032 - - gmx:100788635 171.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3032 3 44195060 44196205 Mtr3g3032 3 44195060 44196205 ECH