Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3025 ATGGCTGAAGTTTGTTGGCCATATTTTGATCCTGAGTATGAGAATTTCAGCAACAGAATTAACCCTCCAAGGGTCTCCGTGGACAATGCTAGTTGTCGTAATTGTACACTAATCAAGTTTGATAGTGTTAACAAACCTGGAATTCTACTGGAAGTGGTGCAAATCTTGACAGACCTTGACTTCATAATCACCAAAGCTTACGTATCTTCTGATGGAGGATGGTTCATGGATGTATTTCATGTCACGGATCAACAAGGAAAAAAGATAACAGATAGCAAAACCATTGATCTCATTGAAAAGGCTCTAGGACCGAAAAGCCAGAACAAAGATGAATTGAAGAATTGGTCAGGCAAACGGGTTGGGGTGCATTCTGTTGGTGATCATATAGTGATTGAGCTAATCGGGAGAGACCGGCCTGGTCTGTTGTCTGAGATATCTGCTGTTCTTGCTAGCCTCCATTTTAACGTGGTTGTAGCTGAAGTATGGACTCATAACAGGAGAACAGCTTGTGTCCTTTATGTCAATGATGGTGCGAGACAAGCCGTGGATGATCCAAAAAGAATATCTCTTATGGAGGAGCAGCTCAATAACATTTTACGTGGATATGAGGATGGAGAGAAAGTTGCTAGTAGGACCAGTTTGTCCATGAGTTTCACCCATATTGATAGGCGGCTCCACCAAATGTTGTTTGCTGATCGGGATTATGAAAGTTATGGAGTAACAACAACAGACGTGGAATGTCCTCCCTCTTTCCGGCCAAAAATTACGATAGAATGTTGTGAGGAAAAAGGATACTCGGTGGTTAATGTCAGATGCAAAGATCGCGCAAAACTCATGTTTGACATTGTTTGCACTCTTACTGATATGCAATATGTTGTTTCCCATGCCACAATCTCATCAGACCGCCCTTATGCATCGCAGGAATACTTTATACGCCACATGGACGGATGCACGCTTGATACTGAAGGGGAAAAAGAGAGGGTCATCAAATGCATTGAAGCTGCCATTCAAAGAAGAGTAAGCGAGGGTGTGAGCCTAGAGTTGTGTGCAAAGGATAGAGTGGGATTGCTCTCTGAAGTAACAAGAATTCTGAGAGAGAACGGCCTAACAGTTTGTAGAGCCGGTATATCAACCAGAGGGGAACAAGCTCTTAATGTCTTCTATGTGAGGGATGCATCAGGGAACTCAGTGGACATGAAGACTATAGAAGCACTTCGTAAAGAAATCGGCAAGACAATGATGGTAGATGTGAAGAAAGTACCAACACATGACAAAGAACAGGAGACACGAGGATGGGCTAAAACTAGCTTCTTCTTTGGTAACTTGTTGGAAAGGTTCTTGGCTTAA 1347 0.4276 MAEVCWPYFDPEYENFSNRINPPRVSVDNASCRNCTLIKFDSVNKPGILLEVVQILTDLDFIITKAYVSSDGGWFMDVFHVTDQQGKKITDSKTIDLIEKALGPKSQNKDELKNWSGKRVGVHSVGDHIVIELIGRDRPGLLSEISAVLASLHFNVVVAEVWTHNRRTACVLYVNDGARQAVDDPKRISLMEEQLNNILRGYEDGEKVASRTSLSMSFTHIDRRLHQMLFADRDYESYGVTTTDVECPPSFRPKITIECCEEKGYSVVNVRCKDRAKLMFDIVCTLTDMQYVVSHATISSDRPYASQEYFIRHMDGCTLDTEGEKERVIKCIEAAIQRRVSEGVSLELCAKDRVGLLSEVTRILRENGLTVCRAGISTRGEQALNVFYVRDASGNSVDMKTIEALRKEIGKTMMVDVKKVPTHDKEQETRGWAKTSFFFGNLLERFLA* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3025 448 Pfam ACT domain 130 197 IPR002912 -
Mtr3g3025 448 Pfam ACT domain 37 85 IPR002912 -
Mtr3g3025 448 ProSiteProfiles ACT domain profile. 37 117 IPR002912 -
Mtr3g3025 448 ProSiteProfiles ACT domain profile. 345 425 IPR002912 -
Mtr3g3025 448 CDD ACT_ACR_3 265 339 - -
Mtr3g3025 448 PANTHER FOUR ACT DOMAIN ACT DOMAIN PROTEIN WHICH PROTEIN 4 448 - -
Mtr3g3025 448 SUPERFAMILY ACT-like 125 201 IPR045865 -
Mtr3g3025 448 CDD ACT_ACR_4 343 414 - -
Mtr3g3025 448 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 4 448 IPR040217 -
Mtr3g3025 448 SUPERFAMILY ACT-like 341 412 IPR045865 -
Mtr3g3025 448 ProSiteProfiles ACT domain profile. 130 210 IPR002912 -
Mtr3g3025 448 CDD ACT_ACR_1 35 105 - -
Mtr3g3025 448 Gene3D - 340 425 - -
Mtr3g3025 448 Gene3D - 124 201 - -
Mtr3g3025 448 SUPERFAMILY ACT-like 32 105 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3025 Mtr-Chr3 44137497 44142039 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3025 - - gmx:100789173 771.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3025 3 44137497 44142039 Mtr3g3025 3 44137497 44142039 ECH