Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3021 ATGGCATCCTTGTTATTGAGAAGGTCTAAGACCTTATTAGTTCCTAATCACCAGCACCTTCAAAGTAAGCTAGCTAGCTTGTTACTAGGATCAGGATCAACATTCATCAACCGCCACTCTTCTTCTCAGCCATTTGTTGCATCATCATCGCGTTATGAATCCACAAAAGCCCAGGCACAGTTGGATTTGCAGCATGTCATCCACGATGACCATCATGATCAGTTCATCGATTTTCCTGGAGGGAAAGTTGGATTCACTTCTGAAATGAGATTCATTTCAGATGCTTCTCACAAAAGGGTTCCTTGTTATCGAGTCCTTGATGAAGATGGTGAGCCCATGAAACACACCAATCATGTTCAGGTTAGCAAAGAAATGGCTGTGAGGATGTATTCTGAGATGGTCACTCTTCAAACTATGGACAGCATATTCTATGAGGTACAGAGACAAGGAAGAATTTCCTTCTACCTCACTTCAATGGGAGAAGAAGCAGTTAACATTGCATCAGCAGCTGCACTTTCTTCTGATGATATTATCTTGCCTCAGTACCGTGAGCCTGGAGTTCTGCTATGGCGCGGTTTCACTCTGCAACAATTTGCTCATCAATTATTTGGAAACACAAATGATTTTGGTAAAGGAAGACAAATGCCTATACACTACGGCTCTAACAACCACAATTACTTCACAGTCTCATCCCCTATTGCAACACAACTTCCTCAAGCTGTAGGCGCTGCTTATTCGCTTAAAATGGACGGAAAAAGTGCTTGTGCAGTAACTTTTTGTGGGGATGGAGGTACTAGTGAGGGAGATTTCCATGCTGGTATGAATTTTGCAGCAGTAATGGAGGCACCAGTTATTTTTATTTGTCGTAACAATGGATGGGCCATCAGTACCCCTGTCGAAGAACAATTTCGAAGTGATGGTATTGTGGTGAAAGGTCAAGCTTATGGAATATGGAGTATTCGAGTAGATGGAAATGATGCACTTGCTGTTTATAGTGCAGTTCATACTGCACGTGAAATTGCTATAAAAGAACAAAGACCAGTCTTAATCGAGGCTCTTAGTTATAGAGTAGGACACCACTCTACATCTGACGATTCAACGAAGTACAGACCAATTGATGAGATCGAATATTGGAAGATGGAAAGAAATCCTGTGAATAGATTCAAAAAGTGGGTTGAAAGAAATGGTTGGTGGAGTGACAAGGATGAATTGGAGCTTAGAAGCAGTGTCAGGAAGCAGTTAATGCAGGCTATTCAAGTGGCAGAGAAAGCACAAAAACCTCCACTTGAGGACATGTTTACTGATGTCTATGACAAACTTTCATCAAACCTTGAGGAACAAGAAAGAGAACTTAGAAAAGTCATTGAGAAGCATCCCAAAGATTACCCTTCTGATGTTCCTCTGTAG 1407 0.4151 MASLLLRRSKTLLVPNHQHLQSKLASLLLGSGSTFINRHSSSQPFVASSSRYESTKAQAQLDLQHVIHDDHHDQFIDFPGGKVGFTSEMRFISDASHKRVPCYRVLDEDGEPMKHTNHVQVSKEMAVRMYSEMVTLQTMDSIFYEVQRQGRISFYLTSMGEEAVNIASAAALSSDDIILPQYREPGVLLWRGFTLQQFAHQLFGNTNDFGKGRQMPIHYGSNNHNYFTVSSPIATQLPQAVGAAYSLKMDGKSACAVTFCGDGGTSEGDFHAGMNFAAVMEAPVIFICRNNGWAISTPVEEQFRSDGIVVKGQAYGIWSIRVDGNDALAVYSAVHTAREIAIKEQRPVLIEALSYRVGHHSTSDDSTKYRPIDEIEYWKMERNPVNRFKKWVERNGWWSDKDELELRSSVRKQLMQAIQVAEKAQKPPLEDMFTDVYDKLSSNLEEQERELRKVIEKHPKDYPSDVPL* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3021 468 Coils Coil 437 457 - -
Mtr3g3021 468 CDD TPP_E1_PDC_ADC_BCADC 129 421 - -
Mtr3g3021 468 Pfam Dehydrogenase E1 component 132 428 IPR001017 GO:0016624
Mtr3g3021 468 Gene3D - 71 466 - -
Mtr3g3021 468 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA 1, MITOCHONDRIAL-LIKE 44 468 - -
Mtr3g3021 468 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA, MITOCHONDRIAL 44 468 - -
Mtr3g3021 468 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 100 463 IPR029061 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3021 Mtr-Chr3 44116464 44121555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3021 44 305 Acyl Lipid Metabolism Gene Families AT1G21400 70.833 1.94e-138 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3021 K00166 - gmx:100796766 736.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3021 3 44116464 44121555 Mtr3g3021 3 44116464 44121555 ECH