Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3015 ATGGCTAATAATGCTGCTGCGTGTGCTGAGAGAGCAACCAGTGATTTGCTCATTGGTCCTGATTGGGCTATCAACATTGAATTATGTGATATCATCAACATGGACCCTAGGCAAGCAAAGGATGCATTGAAGATAATTAAGAAGCGCTTAGGCAGTAAAAATCCCAAAATACAGCTGCTGGCTCTTTTTGTACTGGAGACCCTTACTAAAAATTGTGGTGAAAGTGTATTTCAGCAGATCATTGAGCGTGATATATTACATGAAATGGTTAAGATAGTGAAGAAGCGGCCGGACTTAAGTGTGAGGGAAAAGATACTGATTTTAATTGATGCATGGCAAGAAGCTTTTGGTGGCCCAAGCGGAGTTTTCCCCCAATACTATGCAGCATATAATGAACTAAAGGCCGCTGGAGTTGAATTTCCACCAAGAGAAGAAAATAGTGTGCCATTCTTCACACCTCCTCAAACTCAGCCGATTGTTAATTCTGCTGCAGAATTTGATGATGCTGCTATTCAGGCTTCTCTTCAGTCAGATGCATCTGACCTTAGTGTACTAGAGATTAAAAATGCTCAAGGGCTGGCTGATGTTTTGACGGAAATGCTCAGTGCTTTGAATCCGAAAGACCCCGAGGGCGTGAAGGAGGAAGTGATTGTTGATCTTGTTGACCAGTGCCGTTCTTACCAGAAACGTGTCATGCTTCTTGTGAACAGTACTGCGGATGAGGAGCTTTTAGGTCTGGGATTGGCACTGAATGACAGCCTTCAGCGAGTACTCCTTCAACATGACAATATTGCGAAAGGAACTGCTAATTCAGGTGCAAGAGAAGTAGATACTCCAGTTTTGCCACTTGTACATGTAAACCATGAAGATGATGAGTCAGAAGATGATTTTGGTCAATTAGCCCATAGGTCTTCACGAGATACTCATACACAGAATCGGAAACCAGAGTCAGTGAGGATGAACTCGCTTATTCCCCCACCACCAGCATCAAGGATGCCAGTCTACTCTGGTACTAGCATGGTTGACTATCTTAGTGGTGATGCATACAAGGCAGAAGGATCCCTTGAAAACTCAGAACCAACTTCATTTGCAGCTCCTCTTCATTCTAGCCCTAATCCTACCTCATCTGCTATTCCTACAGAGTCTTCAACCCATCCTCATGCCACTACTACCTCATCACCAATTTATAGCAGACAGCCTATATATGATGAGCCATCTCCCATGAAGACTTCTGAACCGCTGCCTCCAGCTCCCTGGGATACACAAGCTCCTGTCGTGATTCCACCCCCACCTTCAAAGTATAATCAAAGACAACAGTTTTTTGAGCAACAAGGTTCATCTCATTCAAGTAATGGATCAAGTTCGTCTACTGACAGCTTGCTGGGACAAACTCAAAATCTCTCTCTGAATTCATCCACCCCAACCAAAGAACAGAAGCCAGAAGATGCCCTTTTCAAAGATCTAGTTGATTTTGCAAAATCGAAAACCTCTTCATCCTCCAAACCCAATAATAGGTCATATTGA 1524 0.4344 MANNAAACAERATSDLLIGPDWAINIELCDIINMDPRQAKDALKIIKKRLGSKNPKIQLLALFVLETLTKNCGESVFQQIIERDILHEMVKIVKKRPDLSVREKILILIDAWQEAFGGPSGVFPQYYAAYNELKAAGVEFPPREENSVPFFTPPQTQPIVNSAAEFDDAAIQASLQSDASDLSVLEIKNAQGLADVLTEMLSALNPKDPEGVKEEVIVDLVDQCRSYQKRVMLLVNSTADEELLGLGLALNDSLQRVLLQHDNIAKGTANSGAREVDTPVLPLVHVNHEDDESEDDFGQLAHRSSRDTHTQNRKPESVRMNSLIPPPPASRMPVYSGTSMVDYLSGDAYKAEGSLENSEPTSFAAPLHSSPNPTSSAIPTESSTHPHATTTSSPIYSRQPIYDEPSPMKTSEPLPPAPWDTQAPVVIPPPPSKYNQRQQFFEQQGSSHSSNGSSSSTDSLLGQTQNLSLNSSTPTKEQKPEDALFKDLVDFAKSKTSSSSKPNNRSY* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3015 507 MobiDBLite consensus disorder prediction 355 399 - -
Mtr3g3015 507 Gene3D - 175 273 IPR038425 -
Mtr3g3015 507 SUPERFAMILY GAT-like domain 144 267 - -
Mtr3g3015 507 PANTHER TOM1-LIKE PROTEIN 4 1 506 - -
Mtr3g3015 507 Gene3D - 2 158 IPR008942 -
Mtr3g3015 507 ProSiteProfiles GAT domain profile. 177 266 IPR004152 GO:0035091|GO:0043130
Mtr3g3015 507 MobiDBLite consensus disorder prediction 289 314 - -
Mtr3g3015 507 CDD VHS 10 135 - -
Mtr3g3015 507 PIRSF TOM1 1 507 IPR014645 -
Mtr3g3015 507 Pfam GAT domain 193 267 IPR004152 GO:0035091|GO:0043130
Mtr3g3015 507 MobiDBLite consensus disorder prediction 289 334 - -
Mtr3g3015 507 ProSiteProfiles VHS domain profile. 12 141 IPR002014 GO:0035091|GO:0043130
Mtr3g3015 507 MobiDBLite consensus disorder prediction 352 484 - -
Mtr3g3015 507 SUPERFAMILY ENTH/VHS domain 8 142 IPR008942 -
Mtr3g3015 507 PANTHER TOM1-LIKE PROTEIN 1 506 IPR044836 GO:0035091|GO:0043130|GO:0043328
Mtr3g3015 507 SMART VHS_2 5 137 IPR002014 GO:0035091|GO:0043130
Mtr3g3015 507 MobiDBLite consensus disorder prediction 409 431 - -
Mtr3g3015 507 Pfam VHS domain 9 116 IPR002014 GO:0035091|GO:0043130
Mtr3g3015 507 MobiDBLite consensus disorder prediction 432 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3015 Mtr-Chr3 44077826 44083971 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3015 - - gmx:100792343 798.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3015 3 44077826 44083971 Mtr3g3015 3 44077826 44083971 ECH