Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3007 ATGGATTCAAGTCAATTATTGTGTGAACTTCAAATTCAATCTCACGTGCCAAAAAATTTCATATGGCCAAAGGAGTATCTAGAGGATGCTCATGAAGAGCTCCAAGCACCAGTGGTGGATCTTGAAGGGTTTCTCAAAGGGGACAATGAGGCCACACAACATGCTGCTATGCTCATAAATGAAGCTTGTTTGAACCATGGTTTTTTCCAAGTCATTAATCATGGTGTTGATCTACATCTCATTACTCAAGCTTATGTTCAAATGGACACTATTTTTAAACTCCCACTTCATAGGAAAGAGAGTGTTTATAAGGCACCTGGTTCCATGTGGGGCTATTCTGGTGCTCATGCTCACCGTTTCTCTTCTAAGTTGCCTTGGAAGGAAACTTTCTCTTTCCCCTACCTTGAAAATGCAGTCGAGCCTGTCGTCACTAACTACTTCAAATCTACCCTAGGGGATGATTTTGAACAAGCGGGAGTGACATTTGAGAAGTACTGTAATGCAATGAAAGAGCTGGGAATGAATCTAACAGAGCTATTGGCAATAAGCTTAGAAGTGAATGATCGGTTACATTATAGGGAGTTGTTTGAAGAAGGTTGTTCCATTATGAGGTGCAACAATTACCCATGTTGCAAGCAACCTAGTCTTGTCCTGGGTACAGGCCCTCATTGTGATCCAACCTCAATAACACTACTTCATCAAGATCAAGTTGGAGGTCTTCAAGTTTTTGTTGACAACAAGTGGCATACGGTTCAACCCCTTCCTAACGCAATAGTTGTGAATATTGGAGATACCTTCATGGCATTATCAAATGGAAGGTACAAGAGTTGCCTACATAGGGCAGTGGTTAACCAGCATAAGCAGAGAAGGTCGTTGGCTTTCTTTCTATGTCCCAAAGAAGATAAGGTGGTGAGACCCCCTCATGATATTATTAGCAGAGATGGGACCAAACAGTATCCAGATTTTACATGGTCAGATTTGCTTGAATTCACTCAAAATTATTACAGAGCAGATGAATCCACACTCTCAAATTTCACCAACTGGTTGCTATCTTCCAAATCACAAAACTTTACGTTAATCAACAAATAG 1089 0.4077 MDSSQLLCELQIQSHVPKNFIWPKEYLEDAHEELQAPVVDLEGFLKGDNEATQHAAMLINEACLNHGFFQVINHGVDLHLITQAYVQMDTIFKLPLHRKESVYKAPGSMWGYSGAHAHRFSSKLPWKETFSFPYLENAVEPVVTNYFKSTLGDDFEQAGVTFEKYCNAMKELGMNLTELLAISLEVNDRLHYRELFEEGCSIMRCNNYPCCKQPSLVLGTGPHCDPTSITLLHQDQVGGLQVFVDNKWHTVQPLPNAIVVNIGDTFMALSNGRYKSCLHRAVVNQHKQRRSLAFFLCPKEDKVVRPPHDIISRDGTKQYPDFTWSDLLEFTQNYYRADESTLSNFTNWLLSSKSQNFTLINK* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3007 362 PANTHER GIBBERELLIN 20-OXIDASE 9 354 - -
Mtr3g3007 362 Pfam 2OG-Fe(II) oxygenase superfamily 203 298 IPR044861 -
Mtr3g3007 362 Gene3D - 3 330 IPR027443 -
Mtr3g3007 362 PRINTS Isopenicillin N synthase signature 59 76 - -
Mtr3g3007 362 PRINTS Isopenicillin N synthase signature 223 244 - -
Mtr3g3007 362 PRINTS Isopenicillin N synthase signature 258 284 - -
Mtr3g3007 362 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 9 354 - -
Mtr3g3007 362 Pfam non-haem dioxygenase in morphine synthesis N-terminal 37 135 IPR026992 -
Mtr3g3007 362 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 196 298 IPR005123 -
Mtr3g3007 362 SUPERFAMILY Clavaminate synthase-like 14 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3007 Mtr-Chr3 44009373 44012562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3007 14 350 Glycosyltransferase AT5G59530 27.714 5.62e-32 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3007 K05282 - gmx:100776707 584.334