Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2991 ATGGCAGTCCCAGTCATTGATTTCTCAAAGCTCAATGGTGAAGAAAGGGCCAAAACTTTGGCACAGATTGCTAATGGCTGTGAAGAATGGGGATTCTTTCAGTTGATCAATCACGGCATTTCGGAGGAACTTCTTGAAAGGGTGAAGAAGGTTTCATCTGAGTTCTATAAGCTGGAAAGAGAGGAGAATTTCAAAAACTCCAAAACAGTGAAGCTTCTGAATGATATAGCTGAAAAGAAGAGCAGTGAGAAATTGGAGAATGTGGACTGGGAGGATGTTATCACTCTCTTGGATGATAACGAATGGCCAGAAAATACACCAAGTTTCAGGGAAACCATGTCAGAATATCGGTCTGAGTTAAAGAAACTGGCAGTGAGTCTCACAGAAGTGATGGATGAGAATCTGGGCTTACCAAAAGGATACATCAAGAAGGCACTGAATGATGGAGAAGGAGACAATGCTTTCTTTGGCACCAAGGTCAGCCACTACCCACCCTGCCCTCATCCGGAACTTGTGAATGGTCTCCGAGCTCACACTGATGCAGGAGGTGTCATCCTACTGTTCCAAGATGACAAGGTAGGTGGCCTTCAAATGCTCAAAGATGGGGAATGGCTTGATGTCCAACCTTTGCCAAATGCCATTGTCATCAACACTGGTGATCAGATTGAAGTCCTGAGCAATGGCAGATACAAGAGTTGTTGGCACAGGGTTCTGACCTTTACAGAGGGTACCAGGAGATCAATTGCATCCTTCTATAACCCACCCCTGAAGGCCACTATAAGTCCTGCACCACAATTGGCGGAAAAAGATAACCAACAAGTTGATGACACTTATCCTAAGTTTGTTTTCGGTGACTACATGTCTGTCTATGCTGAGCAGAAGTTCCTCCCCAAGGAACCAAGGTTTAGAGCTGTTAAAGCCATTTGA 927 0.4466 MAVPVIDFSKLNGEERAKTLAQIANGCEEWGFFQLINHGISEELLERVKKVSSEFYKLEREENFKNSKTVKLLNDIAEKKSSEKLENVDWEDVITLLDDNEWPENTPSFRETMSEYRSELKKLAVSLTEVMDENLGLPKGYIKKALNDGEGDNAFFGTKVSHYPPCPHPELVNGLRAHTDAGGVILLFQDDKVGGLQMLKDGEWLDVQPLPNAIVINTGDQIEVLSNGRYKSCWHRVLTFTEGTRRSIASFYNPPLKATISPAPQLAEKDNQQVDDTYPKFVFGDYMSVYAEQKFLPKEPRFRAVKAI* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2991 308 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 2 305 - -
Mtr3g2991 308 Coils Coil 41 61 - -
Mtr3g2991 308 Gene3D - 2 308 IPR027443 -
Mtr3g2991 308 Pfam 2OG-Fe(II) oxygenase superfamily 161 254 IPR044861 -
Mtr3g2991 308 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE OXIDASE 5-LIKE 2 305 - -
Mtr3g2991 308 SUPERFAMILY Clavaminate synthase-like 2 303 - -
Mtr3g2991 308 Pfam non-haem dioxygenase in morphine synthesis N-terminal 3 106 IPR026992 -
Mtr3g2991 308 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 154 254 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2991 Mtr-Chr3 43743748 43745669 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2991 1 271 Glycosyltransferase AT5G59530 32.155 2.27e-42 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2991 K05933 - gmx:100796909 552.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2991 3 43743748 43745669 Mtr3g2991 3 43743748 43745669 ECH