Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2987 ATGGACGAGTTTGGTGTTTTGACCGAACGATATGGATTGAAACCCCAAGGTAAATCAGCTCCAATGGCTTCCATAAAGCGATCCACACCCACACCTCCCACCAATTCTCACTTCCAATCCCAAAACGGATCCAGATCTCCTCAACATTCAACTTTCGATTTTGATTTCGGCGTTAAACCACAGCACTCAGGGGGTTTTGGCGATGCCATTGACGATATCTTCGGTGGAAACACCAAATCAAAGGTCGGCTATGGAGTTTCGTTTGACGATGATCCGATATTCGGATCGGTTTCAACATCTTCTTCGTCGTCTCAAGTTTATGTAGATGATATATTCGGTGGAGTCAATCAAAAAACTGTCGGTGTTGATGATTTATTAAATAACATTGGTGGATTGCATGCAACAAACTCTAAAAGTTCGATTAAAAAATCGCATGATTTTGGTGACTTCATGTCTGGCTTTGGTGGAAGCAGCGTTTCCAATAATGGGAAAGCTAGCATTGAGAAGAATAATCCTCGGAAACCAACTGCCACACCCCATGATGATCCATTTTTAGTATTTGAAACTTCTTCAAGCACAGCATCTTCAGAATCATTCCTGGACTCATTAGAGCAAATCACTAAGAATAGTTCGAAACATACAAGTGGCAGCTCAAGCACCTCCCCATTATTGAGGCCTCCTCCCAAGCCAGTGAATGCTTCAAACTCAATTAACAACTCAAGTTTATCATCATCAATAGACGAGCTTGAGAACTTTGCCAAGGGCCGAGTGCAGAGTAATCCTAGTAGAAAGGCAAATACCAACACCGGTGAGATTAAGCAAAACTCAGCAGCTAAGCCAGTCAAAGATAGAGGAGCTCCAGCTGCAAGAGTGAATCAATTAAATGGTGCAGATGATCTTGAATCCTTTTTCAGCATGGGCTCTCGATCAAGCAGTGCACCGAAGTCAAGGACTACACCTGTGGATCCCATGTTTGATCGCCAAGTAAACAGTAAAGTAAAACATGAAGGGTCACAAAGAGGACCATCAGGATCCCCAGCCAATCCGAAGAAACCTTCTTTCACGTCATCTTTTGACGACTTGTCATTGATTTTTGGCGCTTCCCAGTCATCTGAATTCGAGGAAGTGGAAGGTGAAACTGAAGAAAGAAGAAAAGCGAGATTGGGACGTCATCAGAGAACACAAGAGAGAGCGTTGAAAGCAGTGGCTGATATGAACCAGCGGGACCTTCAATCTAAGCTGGAGCAAGAAGAGAGACGACGAATAGCCGATACTGTGGATGTTCAGATAAAGAGGTGGGCTGCAGGGAAAGAGGGAAATATGCGGGCCTTGCTGTCATCATTGCAAAATGTTCTTTCGCCAGATTATGGGTGGCAACCAGTGTCTCTGACGGATATGATCACTTCAGCTTCGGTAAAAAAAGTGTATAGGAAAGCGACATTATGTATTCACCCAGATAAAGTCCAACAGAAAGGTGCTAGTCTTGAACAGAAATATACCGCAGAGAAGGTTTTTGACATCCTTAAGGAAGCTTGGACCAAGTTCAATGCGGAAGAGCTTCGGTAG 1566 0.4374 MDEFGVLTERYGLKPQGKSAPMASIKRSTPTPPTNSHFQSQNGSRSPQHSTFDFDFGVKPQHSGGFGDAIDDIFGGNTKSKVGYGVSFDDDPIFGSVSTSSSSSQVYVDDIFGGVNQKTVGVDDLLNNIGGLHATNSKSSIKKSHDFGDFMSGFGGSSVSNNGKASIEKNNPRKPTATPHDDPFLVFETSSSTASSESFLDSLEQITKNSSKHTSGSSSTSPLLRPPPKPVNASNSINNSSLSSSIDELENFAKGRVQSNPSRKANTNTGEIKQNSAAKPVKDRGAPAARVNQLNGADDLESFFSMGSRSSSAPKSRTTPVDPMFDRQVNSKVKHEGSQRGPSGSPANPKKPSFTSSFDDLSLIFGASQSSEFEEVEGETEERRKARLGRHQRTQERALKAVADMNQRDLQSKLEQEERRRIADTVDVQIKRWAAGKEGNMRALLSSLQNVLSPDYGWQPVSLTDMITSASVKKVYRKATLCIHPDKVQQKGASLEQKYTAEKVFDILKEAWTKFNAEELR* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2987 521 MobiDBLite consensus disorder prediction 377 395 - -
Mtr3g2987 521 MobiDBLite consensus disorder prediction 231 248 - -
Mtr3g2987 521 ProSiteProfiles dnaJ domain profile. 456 521 IPR001623 -
Mtr3g2987 521 MobiDBLite consensus disorder prediction 161 395 - -
Mtr3g2987 521 MobiDBLite consensus disorder prediction 335 369 - -
Mtr3g2987 521 MobiDBLite consensus disorder prediction 304 318 - -
Mtr3g2987 521 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 1 220 - -
Mtr3g2987 521 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 294 520 - -
Mtr3g2987 521 MobiDBLite consensus disorder prediction 185 222 - -
Mtr3g2987 521 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 294 520 - -
Mtr3g2987 521 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 1 220 - -
Mtr3g2987 521 SUPERFAMILY Chaperone J-domain 373 521 IPR036869 -
Mtr3g2987 521 MobiDBLite consensus disorder prediction 1 59 - -
Mtr3g2987 521 Gene3D DnaJ domain 391 520 IPR036869 -
Mtr3g2987 521 Coils Coil 400 420 - -
Mtr3g2987 521 MobiDBLite consensus disorder prediction 22 51 - -
Mtr3g2987 521 MobiDBLite consensus disorder prediction 255 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2987 Mtr-Chr3 43669452 43674684 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2987 - - gsj:114410390 544.658