Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2981 ATGATTGCACGTCAATTATGCATAGTGTTGCTGCTGCTACACCTGCTGGTGTTTCCCTTGCTAAAGGCAGTTGAAGAGGATGCTTCCAGCAGCGATAGCATCATCTTCACCACACTTGGCAGACCTGACTACGCTTTTGATATCTATTCCCTCCCAATTCATCATCACTACCACCACCAAGAATTACAACTCACTGACGGACACTCCGTCAATTTTAACGGCCAATTCCTTCCCAATCTCACATCCATTAAACTCCTCACTCACCAAGATCCACCTCCTCTTCAACTCGTTTACGTTACTGAGAGAACCGGTTTTCCAACCATATACTACGACGCCGTTTACACAACCACCACCAAAATCAATGATAGGATTCAACTTCCACTGTTACCTAATCACCTCACTCAAACACAGTCTCAACTTTCAATCAAAGATAAACCAAGTTTATCCAGCGACGGTCAATATTTAATCTACGTGTCAACCCACGAGGATCCCGGTGTGCAACGTGTCAGCTGGACCGCCGTTTATTCCACCCATCTTAAATCGGGTAACACCCGAAGACTCACTCCATACGGCGTCGCTGATTTCAGCCCAGCCGTATCTCCTACCGGGAAATGGACAGCAGTTGCTTCTTACGGCGGTAATGGTTGGTCCGGTGAAGTAGAGGATCTCACTACAGACATCTACGTTTTCCTCACTCACGACGGAACTCACAGATACAAAGTAGTTGATCACGGTGGCTGGCCAAGTTGGGTTGATGATCGGACTATTTACTTTCACCGGAGAGGAAACGACGGTTGGTTGAGTATTTACAGAGCAATTCTCACCACTGATTCTTCTTACTCTGTTCTCATCGAACGAGTTACCCCACCGGGTTTACACGTATTCACACCGGCAACTTCACCGGGAAACAACAAATTCATCGCCGTCGCAACGAGAAGACCTGGCTCTAACTTCCGTCACATTGAATTATTCGACCTGGTTAACAACGAGTTCAAGGAGTTAACTCGTTTCGTCTCACCTAATACTCACCATCTCAACCCGTTTATCTCACCCGATTCAGCGCGGGTCGGGTATCACAAGTGCAGGGGAAAAGAAAGTAACACCAGTCCTCAGTTTATGCTAGAGAATGTTCGGAGCCCCGTTCCAAATCTAACTCTCTTCCGGTTCACTGGTTCGTTTCCGGTTTTCTCACCCTCTGGAGATAGAATTGCTTACGTTGAGATGCCTGGTGTTTATGTCGTGAACCGAGACGGTTCGAACCGAAAAAAGGTTTCTGATGCAATGGCTTTCTCAACCGCATGGGACCGGGTTCGACCCGGTGTAATCTACACAGCAGTTGGAGAAACCTTTGCTTCAGAAAGCACTGAGGTTGATATCATATCCATCGATGTTGACCGAAATTTCGTCAAGAAGTTGACTCTGGATGGAAAGAACAATGCCTTTCCGTCACCATCACCGGATGGAAAATGGATTGTTTTCCGTTCAGGTCGATCAGGTCATAAGAATCTTTACATAATGGATGCCGTTCACGGAGAGAAAAACGGGCTTAAGAGACTAACTGAGGGTCCATGGTCTGATACAATGTGCAACTGGTCCCCTGATGGAGAATGGATTGCTTTTGCATCGGATCGTCATGACCCAGGAAGTGGAAGCTTTGAAATTTATTTGATCCACCCGGATGGAACCGGGTTGAGGAAACTGATTCACAGTGGTTCAGGTGGGAGGACGAATCATCCTTATTTTAGCCCTGATGGAAAGAGTATGGTGTTTACATCAGATTATGCAGGAATATCAGCGGAGCCAATCTCTAACCCTCATCATTATCAACCTTACGGTGAAATATTTACCGTGAGGTTGGATGGTTCGGGTTTAACAAGATTGACTCATAATTCTTATGAAGATGGAACCCCTGCTTGGTCACCCAAATATATCAAGCCTGTGAATGTTGAGATGCCTAAGGGTGGACCTTATTGTTCATTTGAGGATTGCCATTGGCTCAACAACATGCCAAACTACATTGTTAGTACAGGGCTACATGCACAATGTGGTCTGTAA 2055 0.4603 MIARQLCIVLLLLHLLVFPLLKAVEEDASSSDSIIFTTLGRPDYAFDIYSLPIHHHYHHQELQLTDGHSVNFNGQFLPNLTSIKLLTHQDPPPLQLVYVTERTGFPTIYYDAVYTTTTKINDRIQLPLLPNHLTQTQSQLSIKDKPSLSSDGQYLIYVSTHEDPGVQRVSWTAVYSTHLKSGNTRRLTPYGVADFSPAVSPTGKWTAVASYGGNGWSGEVEDLTTDIYVFLTHDGTHRYKVVDHGGWPSWVDDRTIYFHRRGNDGWLSIYRAILTTDSSYSVLIERVTPPGLHVFTPATSPGNNKFIAVATRRPGSNFRHIELFDLVNNEFKELTRFVSPNTHHLNPFISPDSARVGYHKCRGKESNTSPQFMLENVRSPVPNLTLFRFTGSFPVFSPSGDRIAYVEMPGVYVVNRDGSNRKKVSDAMAFSTAWDRVRPGVIYTAVGETFASESTEVDIISIDVDRNFVKKLTLDGKNNAFPSPSPDGKWIVFRSGRSGHKNLYIMDAVHGEKNGLKRLTEGPWSDTMCNWSPDGEWIAFASDRHDPGSGSFEIYLIHPDGTGLRKLIHSGSGGRTNHPYFSPDGKSMVFTSDYAGISAEPISNPHHYQPYGEIFTVRLDGSGLTRLTHNSYEDGTPAWSPKYIKPVNVEMPKGGPYCSFEDCHWLNNMPNYIVSTGLHAQCGL* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2981 684 Gene3D - 283 445 IPR011042 -
Mtr3g2981 684 SUPERFAMILY Tricorn protease N-terminal domain 295 641 - -
Mtr3g2981 684 SUPERFAMILY Tricorn protease N-terminal domain 131 351 - -
Mtr3g2981 684 PANTHER DPP6 N-TERMINAL DOMAIN-LIKE PROTEIN 31 662 - -
Mtr3g2981 684 Pfam WD40-like Beta Propeller Repeat 146 162 IPR011659 -
Mtr3g2981 684 Pfam WD40-like Beta Propeller Repeat 471 505 IPR011659 -
Mtr3g2981 684 Pfam WD40-like Beta Propeller Repeat 575 593 IPR011659 -
Mtr3g2981 684 Pfam WD40-like Beta Propeller Repeat 516 555 IPR011659 -
Mtr3g2981 684 Gene3D - 446 548 IPR011042 -
Mtr3g2981 684 Gene3D - 549 648 IPR011042 -
Mtr3g2981 684 Gene3D - 95 255 IPR011042 -
Mtr3g2981 684 PANTHER DPP6 N-TERMINAL DOMAIN-LIKE PROTEIN 31 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2981 Mtr-Chr3 43631622 43634050 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2981 - - mtr:MTR_3g088425 1424.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2981 3 43631622 43634050 Mtr3g2981 3 43631622 43634050 ECH