Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2968 ATGAATTCATTGATTTTGTTTTCCATCCAGATAAGAGCAATGTCGAAGAGAAAAAGATCCCCCATAAAATCACTACCTCCTCCTCTTCCACCTTCAACACCACCAACACCCCATACCCAAACCCGCCACTCCACCAACCTCTCAAAATCCCGGGCATGGATCCCTCTCAACATAACCCGACAAGAACTCTCCTTACCTCTCACCTTCCCCACCGGTCAAACCTTCCGCTGGAAAAACACCGCACCTTCTCAATACACCGGTGTCGTTGGGTCCCACCTTATTTCCCTCAAACATCTCCACAACGGCGACGTTTGCTACACCCTTCACTCCCAATCTCCCTCCAACGATGATTGCAAAACGGCATTGCTTGATTTCTTAAACGCGGATGTTTCTCTTGCTGACACGTGGAAGGTGTTTTCGGATTCCGATGAAAGATTTGCGGAACTAGCACAACATTTGAGTGGTGCTAGGGTTTTGAGACAAGATCCCTTTGAATGCTTGATTCAGTTTATGTGTTCTTCTAATAATCATATTAGTAGAATTACTAAAATGGTTGATTATGTTTCGTCTCTCGGAACTTACTTGGGTTGCGTCGAAGGCTTCGATTTCCACGCTTTTCCTACTCTGAACCAGCTTTCATTAGTTTCTGAACAGCAACTAAGAGACGCTGGTTTTGGTTACAGGGCTAAGTATATAACTGGCACTGTGAATGTTTTGCAATCAAAACCTGAAGGTGGGGAAGAATGGCTTTATTCTCTTCGCAAATTGGAGCTTGAAGATGTAATATCCGAACTCATCAAGTTACCTGGAGTGGGTCCTAAAGTGGCTGCTTGTATAGCTCTTTACTCACTTGATCAACACCATGCAATTCCTGTTGATGTTCATATTTGGCGGATTGCCCAAAAGTATATCTTACCCGAGCTTGCAGGTTCCAAGTTGACACAGAAACTTCACAGTCGTGTTGCAGAGGCTTTTGTCACAAAATTTGGTAAATATGCTGGCTGGGCTCAAGCTGTTCTATTTATTGCTGAGTTGCCTTCACAAAAGGCCATTCTACCTTCACATTTGAGGGCTACCAAACAGCAGAGTCCAGCAAATATAGAAAACAGTGAAGAAGAAATTGAGTGA 1128 0.4388 MNSLILFSIQIRAMSKRKRSPIKSLPPPLPPSTPPTPHTQTRHSTNLSKSRAWIPLNITRQELSLPLTFPTGQTFRWKNTAPSQYTGVVGSHLISLKHLHNGDVCYTLHSQSPSNDDCKTALLDFLNADVSLADTWKVFSDSDERFAELAQHLSGARVLRQDPFECLIQFMCSSNNHISRITKMVDYVSSLGTYLGCVEGFDFHAFPTLNQLSLVSEQQLRDAGFGYRAKYITGTVNVLQSKPEGGEEWLYSLRKLELEDVISELIKLPGVGPKVAACIALYSLDQHHAIPVDVHIWRIAQKYILPELAGSKLTQKLHSRVAEAFVTKFGKYAGWAQAVLFIAELPSQKAILPSHLRATKQQSPANIENSEEEIE* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2968 375 Coils Coil 367 375 - -
Mtr3g2968 375 MobiDBLite consensus disorder prediction 17 46 - -
Mtr3g2968 375 Gene3D Hypothetical protein; domain 2 162 286 - -
Mtr3g2968 375 SMART endo3end 172 344 IPR003265 GO:0006284
Mtr3g2968 375 Gene3D - 39 126 - -
Mtr3g2968 375 PANTHER 8-OXOGUANINE DNA GLYCOSYLASE 52 360 - -
Mtr3g2968 375 PANTHER N-GLYCOSYLASE/DNA LYASE 52 360 - -
Mtr3g2968 375 Gene3D - 136 345 IPR023170 -
Mtr3g2968 375 SUPERFAMILY TATA-box binding protein-like 45 161 - -
Mtr3g2968 375 MobiDBLite consensus disorder prediction 23 37 - -
Mtr3g2968 375 Pfam HhH-GPD superfamily base excision DNA repair protein 168 303 IPR003265 GO:0006284
Mtr3g2968 375 CDD ENDO3c 164 342 IPR003265 GO:0006284
Mtr3g2968 375 SUPERFAMILY DNA-glycosylase 162 343 IPR011257 GO:0003824|GO:0006281
Mtr3g2968 375 Pfam 8-oxoguanine DNA glycosylase, N-terminal domain 56 167 IPR012904 GO:0003684|GO:0006289|GO:0008534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2968 K03660 - gmx:100789749 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2968 3 43553729 43556424 Mtr3g2968 3 43553729 43556424 ECH