Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2967 ATGGGAGAGTGGTGGCGTTTTTTATTACATGCACTAATCTTAACCGTGTCTCTTTGCACGGTCCATGGTGCCAATGTTACCTACGACAGAACCTCGTTAGTCATTAACGGCCATCATAAAATCCTCTTCTCTGGTTCAATTCATTATCCTCGTAGCACTCCTCAGATGTGGCCTGACTTAATTTCCAAAGCCAAAGAAGGAGGATTAGATGTCATACAAACTTACGTGTTTTGGAATCTTCACGAACCTCAACAAGGCCAGTATGAGTTTAATGGAAGGTTTGATTTAGTGGGATTCATTAAAGAAATTCAAGCACAAGGTTTATATGTGACCCTTCGAATTGGACCATATATTGAGAGTGAATGCACTTATGGGGGTCTACCATTATGGTTACATGATGTTCCTGGAATTGTATTTAGAACTGATAATGATCAATTTAAGTTTCACATGCAAAGATTCACTACCAAAATAGTCAACATGATGAAATCAGCCAATCTTTTTGCTTCACAAGGAGGACCTATCATACTATCCCAGATTGAGAATGAATATGGCAGCATTCAAAGTAAGTTTCGAGCGAATGGGTTGCCTTATATTCATTGGGCTGCCCAAATGGCCGTGGGACTTCAAACCGGTGTGCCTTGGATGATGTGTAAACAAGATGATGCTCCTGATCCAGTGATCAACGCATGCAATGGCATGCAATGTGGGAGAAACTTTAAGGGGCCAAACTCACCTAACAAGCCTTCACTATGGACAGAGAATTGGACTAGTTTTTTACAAGCTTTTGGTGGAGCACCATACATGAGATCAGCTTCAGACATTGCCTATAATGTTGCCTTGTTCATAGCAAAGAAAGGAAGTTATGTCAATTATTACATGTACCATGGAGGAACCAATTTTGATAGATTGGCCTCTGCTTTCATAATAACAGCTTATTATGATGAGGCTCCACTGGATGAATATGGTTTAGTTAGACAACCAAAATGGGGACATCTTAAGGAGCTACATGCTTCAATCAAGTCATGTTCACAACCTCTACTTGATGGAACTCAAACCACCTTCAGCTTAGGCTCAGAGCAACAAGCTTATGTTTTCAGAAGTTCCACAGAATGTGCTGCTTTCTTGGAAAATAGTGGACCTAGGGATGTGACAATCCAATTTCAAAATATTTCGTATGAATTGCCTGGGAAATCAATCAGTATCCTACCAGGCTGCAAGAATGTAGTCTTCAACACCGGCAAGGTGAGTATACAGAATAATGTCAGAGCAATGAAACCACGATTACAGTTCAATTCAGCTGAAAATTGGAAAGTGTATACAGAAGCCATCCCTAATTTTGCTCATACTTCGAAAAGAGCAGATACATTATTAGATCAAATCAGTACAGCAAAAGATACATCTGACTATATGTGGTACACTTTCAGGTTTAATAACAAATCTCCTAATGCAAAATCTGTTCTTAGTATATACAGTCAAGGAGATGTTTTGCATTCTTTCATCAATGGAGTTTTAACAGGTTCTGCACATGGAAGTCGCAACAATACGCAAGTTACAATGAAGAAAAATGTCAATCTAATAAACGGGATGAACAACATCTCCATACTTAGTGCAACAGTGGGATTGCCGAACTCGGGAGCATTTCTAGAGAGCAGAGTTGCTGGTTTGCGTAAAGTGGAAGTCCAAGGAAGAGATTTCAGTAGTTACTCATGGGGATATCAGGTTGGGTTGTTGGGAGAAAAATTACAAATCTTTACAGTCAGTGGATCAAGTAAAGTTCAGTGGAAAAGTTTTCAAAGCTCCACTAAACCACTCACATGGTATCAGACCACATTCCATGCACCAGCTGGCAACGATCCTGTAGTGGTTAACCTTGGTTCTATGGGAAAGGGACTTGCTTGGGTTAATGGCCAAGGTATTGGTCGATATTGGGTATCTTTCCACAAACCAGATGGAACTCCTTCACAACAATGGTATCACATACCACGTTCCTTCCTAAAATCTACAGGGAACCTACTTGTTATACTTGAAGAAGAAACTGGAAACCCCTTAGGAATCACTCTAGACACAGTATACATCAAGAATTGA 2085 0.4005 MGEWWRFLLHALILTVSLCTVHGANVTYDRTSLVINGHHKILFSGSIHYPRSTPQMWPDLISKAKEGGLDVIQTYVFWNLHEPQQGQYEFNGRFDLVGFIKEIQAQGLYVTLRIGPYIESECTYGGLPLWLHDVPGIVFRTDNDQFKFHMQRFTTKIVNMMKSANLFASQGGPIILSQIENEYGSIQSKFRANGLPYIHWAAQMAVGLQTGVPWMMCKQDDAPDPVINACNGMQCGRNFKGPNSPNKPSLWTENWTSFLQAFGGAPYMRSASDIAYNVALFIAKKGSYVNYYMYHGGTNFDRLASAFIITAYYDEAPLDEYGLVRQPKWGHLKELHASIKSCSQPLLDGTQTTFSLGSEQQAYVFRSSTECAAFLENSGPRDVTIQFQNISYELPGKSISILPGCKNVVFNTGKVSIQNNVRAMKPRLQFNSAENWKVYTEAIPNFAHTSKRADTLLDQISTAKDTSDYMWYTFRFNNKSPNAKSVLSIYSQGDVLHSFINGVLTGSAHGSRNNTQVTMKKNVNLINGMNNISILSATVGLPNSGAFLESRVAGLRKVEVQGRDFSSYSWGYQVGLLGEKLQIFTVSGSSKVQWKSFQSSTKPLTWYQTTFHAPAGNDPVVVNLGSMGKGLAWVNGQGIGRYWVSFHKPDGTPSQQWYHIPRSFLKSTGNLLVILEEETGNPLGITLDTVYIKN* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2967 694 Pfam Beta-sandwich domain in beta galactosidase 346 415 IPR041392 -
Mtr3g2967 694 Pfam Glycosyl hydrolases family 35 32 337 IPR031330 -
Mtr3g2967 694 SUPERFAMILY Galactose-binding domain-like 569 691 IPR008979 -
Mtr3g2967 694 PRINTS Glycosyl hydrolase family 35 signature 36 53 IPR001944 GO:0004553|GO:0005975
Mtr3g2967 694 PRINTS Glycosyl hydrolase family 35 signature 57 75 IPR001944 GO:0004553|GO:0005975
Mtr3g2967 694 PRINTS Glycosyl hydrolase family 35 signature 112 131 IPR001944 GO:0004553|GO:0005975
Mtr3g2967 694 PRINTS Glycosyl hydrolase family 35 signature 169 184 IPR001944 GO:0004553|GO:0005975
Mtr3g2967 694 PRINTS Glycosyl hydrolase family 35 signature 250 265 IPR001944 GO:0004553|GO:0005975
Mtr3g2967 694 PRINTS Glycosyl hydrolase family 35 signature 287 302 IPR001944 GO:0004553|GO:0005975
Mtr3g2967 694 PRINTS Glycosyl hydrolase family 35 signature 306 322 IPR001944 GO:0004553|GO:0005975
Mtr3g2967 694 PRINTS Glycosyl hydrolase family 35 signature 602 616 IPR001944 GO:0004553|GO:0005975
Mtr3g2967 694 PRINTS Glycosyl hydrolase family 35 signature 629 645 IPR001944 GO:0004553|GO:0005975
Mtr3g2967 694 PANTHER BETA-GALACTOSIDASE RELATED 6 693 IPR001944 GO:0004553|GO:0005975
Mtr3g2967 694 SUPERFAMILY (Trans)glycosidases 23 342 IPR017853 -
Mtr3g2967 694 PANTHER BETA-GALACTOSIDASE 6 693 - -
Mtr3g2967 694 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 171 183 IPR019801 GO:0004553|GO:0005975
Mtr3g2967 694 Gene3D - 435 570 - -
Mtr3g2967 694 Gene3D - 572 692 - -
Mtr3g2967 694 Gene3D Glycosidases 20 343 - -
Mtr3g2967 694 SUPERFAMILY Galactose-binding domain-like 399 555 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2967 Mtr-Chr3 43545883 43553198 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2967 7 692 Glycoside Hydrolase AT5G63800 58.129 0.0 850
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2967 - - gmx:100789220 1144.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2967 3 43545883 43553198 Mtr3g2967 3 43545883 43553198 ECH