Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2963 ATGAAATTCCGAAACTCTTTATTTTACTTTATGATCATATTTTCATCAACCGTTATAATTCTGGAACACTTCGCGGTTTCAACCGCCGTGAAAATACCTTCCGCCGCTTACGACCGTGTTTTGTTCTCCGATCGGAGATGCTGCGATCGAGAGAACAACGAGTTAACTCTCTCACCGTGCAAAAACGTGACACGGAAGGCTAAGACAGCGACGAACTGCGAAGTTTGGAACGAAGCATGTTCAGAAGCGGTGTTAAGCGTAGCACGGTTGCCGGAGACGGTGGAGTGGTTGAAAAGTGTTCGGAGGAAGATCCATGAAAATCCGGAGTTAGCTTTTGAGGAAATCGAGACAAGTCGTTTGATAAGAAAGGAGTTGGATCTGATGGAAGTTAGTTATCGTTACCCGCTCGCGAAAACCGGTATTCGTGCTTGGATCGGTACTGGTGGACCGCCTTTTGTTGCCGTTAGAGCTGACATGGATGCACTTCCCATCCAGGAGGGTGTGGAGTGGGAGTACAAGTCTAAAGTTGCCGGCAAAATGCACGCTTGTGGGCACGACGCACATGTGGCGATGCTCATTGGAGCTGCCAAGATCTTGAAAACTCGAGAGCATTTATTAAAGGGTACTGTAATTCTGTTATTCCAGCCAGCAGAAGAAGCTGGGAATGGTGCAAAGCGAATGATACAAGACGGTGCTTTGGAGGATGTGGAGGCTATATTTGCAGTTCATGTATCCCATGAGCACCCGACTGGTATGATTGGGTCGAGGCCTGGACCCCTGTTGGCTGGATGTGGATTTTTCAGAGCCGTGATAAGTGGGAAAAGAGCCTCTGCTGCGAACCCTCGTAACTCTGCTGATCCTGTTTTGGCCGCTTCAGCAGCAGTTATCAGCATACAGGGCATTGTCTCCCGCGAATCAAATCCATTGGATTCACAGGTCGTGTCTGTAACTTCATTTAATGGAGGCAATAGTCATGACATGATACCAGACTCAGTGGTCATTGGTGGGACCTTCAGAGCGTTTTCTAACACCAGTTTTTACCAGCTGCTAGAAAGAATAGAGCAGGTAATTGTGCAACAGGCTAGTGTTTACAGTTGCTTTGCAGAAGTTGACTTCTTTGAAAAGGAGTACACTATTTACCCTCCCACGGTTAATGATGACCAAATGTATGAGCATGTGAAAAAAGTGTCCATCGATTTGCTGGGTCAAAAGAATTTCAGGGTAGTCCCACCTATGATGGGTGCTGAAGATTACTCTTTTTACTCCCAGGTCATTCCTTCAGCTTTCTTCTACATAGGGATAAGGAACGAAACACTAGGGTCTACTCACACAGGACACTCTCCACATTTCACGATCGATGAAGATGCTCTACCAATAGGAGCTGCTGTTCATGCCACCATTGCAGAGAGGTACCTCAATGAACATGGTTGA 1431 0.4668 MKFRNSLFYFMIIFSSTVIILEHFAVSTAVKIPSAAYDRVLFSDRRCCDRENNELTLSPCKNVTRKAKTATNCEVWNEACSEAVLSVARLPETVEWLKSVRRKIHENPELAFEEIETSRLIRKELDLMEVSYRYPLAKTGIRAWIGTGGPPFVAVRADMDALPIQEGVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKTREHLLKGTVILLFQPAEEAGNGAKRMIQDGALEDVEAIFAVHVSHEHPTGMIGSRPGPLLAGCGFFRAVISGKRASAANPRNSADPVLAASAAVISIQGIVSRESNPLDSQVVSVTSFNGGNSHDMIPDSVVIGGTFRAFSNTSFYQLLERIEQVIVQQASVYSCFAEVDFFEKEYTIYPPTVNDDQMYEHVKKVSIDLLGQKNFRVVPPMMGAEDYSFYSQVIPSAFFYIGIRNETLGSTHTGHSPHFTIDEDALPIGAAVHATIAERYLNEHG* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2963 476 Pfam Peptidase family M20/M25/M40 154 469 IPR002933 GO:0016787
Mtr3g2963 476 CDD M20_IAA_Hyd 97 472 IPR044757 GO:0009850|GO:0016787
Mtr3g2963 476 TIGRFAM amidohydrolases: amidohydrolase 99 460 IPR017439 GO:0016787
Mtr3g2963 476 SUPERFAMILY Bacterial exopeptidase dimerisation domain 262 381 IPR036264 -
Mtr3g2963 476 PANTHER PEPTIDASE M20 FAMILY MEMBER 39 475 IPR017439 GO:0016787
Mtr3g2963 476 Gene3D - 262 381 - -
Mtr3g2963 476 PANTHER IAA-AMINO ACID HYDROLASE ILR1-LIKE 6 39 475 - -
Mtr3g2963 476 SUPERFAMILY Zn-dependent exopeptidases 90 474 - -
Mtr3g2963 476 Gene3D Zn peptidases 99 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2963 Mtr-Chr3 43501521 43509773 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2963 K21604 - gmx:100785666 773.081