Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2959 ATGGCGAAAAACGTTTCGATTTTTGGTTTATTGTTTTCTCTTCTTGCGTTGGTTCCTTCTCAGATCTTCGCTGAGGAATCATCAACTGACGCTAAGGAATTTGTTCTTACATTGGATAACACTAATTTCCATGATACTGTTAAGAAGCACGATTTCATCGTCGTTGAATTCTACGCACCTTGGTGTGGACACTGTAAGAAGCTAGCCCCAGAGTATGAGAAGGCTGCTTCTATCTTGAGCACTCACGAGCCACCAGTTGTTTTGGCTAAAGTTGATGCCAATGAGGAGCACAACAAAGACCTCGCATCGGAAAATGATGTTAAGGGATTCCCAACCATTAAGATTTTTAGGAATGGTGGAAAGAACATTCAAGAATACAAAGGTCCCCGTGAAGCTGATGGTATCGTTGAGTATTTGAAGAAGCAAAGTGGCCCTGCATCAACAGAAATTAAATCTGCTGATGATGCTACTGCTTTTGTTGGTGACAACAAAGTTGTTATTGTCGGAGTTTTCCCTAAATTTTCTGGAGAGGAGTACGATAACTTCATTGCATTAGCAGAGAAGTTGCGTTCTGACTATGACTTTGGTCACACTTTGAATGCCAAACACCTTCCAAAGGGAGACTCATCAGTGTCTGGGCCTGTGGTTAGGTTGTTTAAGCCATTTGACGAGCTCTCTGTGGACTCAAAGGATTTCAATGTTGAAGCTCTAGAGAAATTCATTGAAGAATCCAGTATCCCAATTGTGACTGTCTTCAACAATGAACCTAGCAATCACCCTTTTGTTGTCAAATTCTTTAACACTCCCAACGCAAAGGCTATGTTGTTCATCAACTTTACTGCCGAAGGAGCTGAATCTTTCAAATCAAAATACCATGAAATTGCTGAGCAATACAAACAACAGGGAGTTAGCTTTCTTGTTGGAGATGTTGAGTCTAGCCAAGGTGCCTTCCAGTATTTTGGACTGAAGGAAGACCAAGTACCTCTAATTATTATTCAGCATAATGATGGCAAGAAATTTTTCAAACCCAATTTGGAACTTGATCAACTCCCAACTTGGTTGAAGGCATACAAGGATGGTAAGGTTGAGCCATTTGTCAAGTCTGAACCTATTCCTGAAACTAACAACGAGCCTGTTAAAGTAGTGGTTGGGCAAACTCTTGAGGACATAGTTTTCAAGTCTGGGAAGAATGTTTTGATTGAGTTTTATGCTCCATGGTGTGGTCACTGCAAACAGTTGGCTCCAATCTTGGATGAAGTAGCTGTCTCATTCCAAAGTGATGCTGATGTTGTTATTGCAAAACTGGATGCAACTGCCAATGATATCCCAACCGACACCTTTGAAGTCCAAGGATATCCAACCTTGTACTTCAGGTCAGCAAGTGGAAAACTATCACAATATGACGGCGGTAGGACAAAGGAAGACATCATTGAATTCATTGAAAAGAACAAGGATAAAACTGGTGCTGCTCATCAAGAAGTAGAACAACCAAAAGCTGCTGCTGCTCAGCCAGAAGCAGAACAAGCAAAAGATGAGCTTTGA 1542 0.4125 MAKNVSIFGLLFSLLALVPSQIFAEESSTDAKEFVLTLDNTNFHDTVKKHDFIVVEFYAPWCGHCKKLAPEYEKAASILSTHEPPVVLAKVDANEEHNKDLASENDVKGFPTIKIFRNGGKNIQEYKGPREADGIVEYLKKQSGPASTEIKSADDATAFVGDNKVVIVGVFPKFSGEEYDNFIALAEKLRSDYDFGHTLNAKHLPKGDSSVSGPVVRLFKPFDELSVDSKDFNVEALEKFIEESSIPIVTVFNNEPSNHPFVVKFFNTPNAKAMLFINFTAEGAESFKSKYHEIAEQYKQQGVSFLVGDVESSQGAFQYFGLKEDQVPLIIIQHNDGKKFFKPNLELDQLPTWLKAYKDGKVEPFVKSEPIPETNNEPVKVVVGQTLEDIVFKSGKNVLIEFYAPWCGHCKQLAPILDEVAVSFQSDADVVIAKLDATANDIPTDTFEVQGYPTLYFRSASGKLSQYDGGRTKEDIIEFIEKNKDKTGAAHQEVEQPKAAAAQPEAEQAKDEL* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2959 513 PANTHER PROTEIN DISULFIDE ISOMERASE 23 505 - -
Mtr3g2959 513 SUPERFAMILY Thioredoxin-like 347 488 IPR036249 -
Mtr3g2959 513 SUPERFAMILY Thioredoxin-like 148 247 IPR036249 -
Mtr3g2959 513 TIGRFAM pdi_dom: protein disulfide-isomerase domain 383 483 IPR005788 GO:0003756
Mtr3g2959 513 TIGRFAM pdi_dom: protein disulfide-isomerase domain 39 142 IPR005788 GO:0003756
Mtr3g2959 513 Gene3D Glutaredoxin 248 372 - -
Mtr3g2959 513 SUPERFAMILY Thioredoxin-like 244 376 IPR036249 -
Mtr3g2959 513 ProSitePatterns Thioredoxin family active site. 399 417 IPR017937 -
Mtr3g2959 513 CDD PDI_b'_family 262 358 - -
Mtr3g2959 513 TIGRFAM ER_PDI_fam: protein disulfide isomerase 35 513 IPR005792 GO:0003756
Mtr3g2959 513 ProSiteProfiles Thioredoxin domain profile. 357 485 IPR013766 -
Mtr3g2959 513 MobiDBLite consensus disorder prediction 487 513 - -
Mtr3g2959 513 Gene3D Glutaredoxin 143 247 - -
Mtr3g2959 513 PANTHER PROTEIN DISULFIDE-ISOMERASE 23 505 - -
Mtr3g2959 513 CDD PDI_b_family 147 243 - -
Mtr3g2959 513 PRINTS Thioredoxin family signature 53 61 - -
Mtr3g2959 513 PRINTS Thioredoxin family signature 61 70 - -
Mtr3g2959 513 PRINTS Thioredoxin family signature 106 117 - -
Mtr3g2959 513 ProSitePatterns Thioredoxin family active site. 54 72 IPR017937 -
Mtr3g2959 513 CDD PDI_a_PDI_a'_C 378 480 - -
Mtr3g2959 513 Gene3D Glutaredoxin 373 488 - -
Mtr3g2959 513 Pfam Thioredoxin-like domain 171 350 - -
Mtr3g2959 513 Pfam Thioredoxin 35 141 IPR013766 -
Mtr3g2959 513 Pfam Thioredoxin 379 482 IPR013766 -
Mtr3g2959 513 CDD PDI_a_family 36 139 - -
Mtr3g2959 513 ProSiteProfiles Thioredoxin domain profile. 14 144 IPR013766 -
Mtr3g2959 513 Gene3D Glutaredoxin 24 142 - -
Mtr3g2959 513 SUPERFAMILY Thioredoxin-like 35 145 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2959 Mtr-Chr3 43465348 43469221 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2959 K09580 - gmx:100170705 867.07