Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2958 ATGGGCTGCGGGGGCTCCAAACTGGAGGAGTTCCCCGTGGTAACTCTCTGCAGAGAACGCAAAAACTTTCTCAAAAACGCTTCCGATCAACGATACGCTCTTGCCGCCGCGCATCTTTCTTATTTACAGTCTCTTAGAGACATCGGGGAAGCTCTGAGGAGATTCTCCGATCAAGATCTTTTTCTTCCAACTGCTTCTACTCCTTCTTCTTCTTCTTCAATTTCTTCCCCTGTTCTCACATTGCCTTCTCGTGAAGGTAAATCTTCTAAGAATAGTAGTAACCACCATGATGATCATGATCATGATGATGATTCTCATTTGCATCTTTCTTCTGGATCGGAGTTAAGTTCACCTTCTTCAGATCATTTTAATCATCATCATGAGCATCAAACACCCGAGGCTGAATCCGAACCTGAACGAGAAAGAGACAGAGGATTTGAATATGGACACGAACCTCAATACGAACCCGAACCCCAACTCGAACCATCTTCTTCTTACGGGTATAATTATCCATATCCATATCCGTATCAACAAGATTGGAATCAAAATCAAAATCCAAATCCAAATCAAGCAGGGGTTAATAGTTATGCTTACTATATGAAGAAATCTGCACCTCGTGGAAAATCTGTGATCTATCAAGAACCGGAGAGACACGTGGCGGAATCTGGACGATGGACTGGTTCTCCTTATGGTTATGGGTATAATGGTATGAATGGGAGTGCTGGTGGTTTTTTTGGTTTCCCGGCGGGACCTTCTACGCCGGCGCCGCCTCCACCGGCTCCGGCTCCGGCTCCACCTTCACCGCCGAGAGTATCTACCTGGGATTTTCTTAACTTTTTTGAGAGTGTTGACAATGGTTATTCTGGTTATGGAAGTTATGGATTAGGGTTAGGGTTAGCTTCGAGTGGGAGTAGTCCTGATTCGAAAGAAGTGAGGGAGAGAGAAGGGATTCCTGAATTAGAAGATGAAACGGAGCAGGAAACTGTGAAGGAGGTTCGTCATGAGAAGAAGAAGAAGAAAGTGGCAGAGGAAGTGGAAAAGGAAAAGGCAGAGGCTGTTAAAGGTGGAGATTTTGGTGAAGGTACTTCGAATTCAAAGGAAGTGCCATTGCAACAGGTGAGTAGTAGTGAGGGAAGTTCCAAAACGGTGCGGTTTCATAGTAGCGAAGGTAGTGGTGATTCGATTTCTTCTAGTGAAAAATTGAGTCCTGATAATGTTGTTCCTAAAGGATCTCCTCCTAGAAAGAAAGGGGTGAGTTTTGAGATTGAGGGTGATGAAGATGCGACGGTTACAACAGTGGAGGTTGATGGTGAATCTTCTATGTTGAGTAGCTTAAGCACTTTGTCTCCACATGGAACTAGGGATCTAAAAGAGGTTGTTAGGGAAATTAGAGATGAGTTTGAGACTGCTTCTAATCATGGAAGAGAGGTTGCATTTCTTCTCGAGGTTTACAAACCACCTTATCAGTCAAGACTTGCTGCATTTAGAGTTATCTATTCAAGGATATTAGAGATGTTAGCACCTTCCAAGCCACCTTCGCATCCTCCATCTGGTCCGCCAATACAATTTTCTTCTAGGACAATGAAATTGGCCAAAGCATACTGTGGGGAGCCTGAGAAAGAGTTGATATCAAATCCGATAAACCTTTCATCTACATTGGAGAAACTTTATGCATGGGAAAAGAAATTATACAAGGAAGTTAAGGATGAAGAGAGGTTAAGAGCTATTTATGAGAAGCAATGCAAGAGATTGAAAGCATTGGATAATCGTGGAGCCGAAGCTACTAAAATTGATGCTGCTGAGTCATTAATAAGAAAGTTGCTTACAAAGATAAACATTTGCATCAAAAGTGTTGAAACTATATCAGGGAGGATACATAAACTAAGGGATGAAGAATTACAGCCTCAGCTTGCAGCATTAATTAATGGATTGATAAGAATGTGGAAATTCATGTTCCAATGCCACCAGAAACAGTTCCAGGCTATCATGGAGAGTAAAACTCAATCTCTCAAATTAAACACTGGTTTGCAAAGAGATGAAGGTTTGAAAGCCATTATAGAACTCGAAAGGGAGCTTCTGAATTGGTGCACACAGTTCAACAATTGGGTCAGGACTCAAAAATCTTATGTTGAAAATTTGAATGGGTGGCTCAGAAGGTGCCTTCATGATGAACCTGAAGAAACAGATGATGGTGTTGTCCCTTACTCTCCAAGTCGGATTGGAGCTCCACAAGCTTTCATTATCTGCAATGATTGGCAGCAAGCAATGAATAGAATTTCAGAAAGAGGGGTGGCAGATGCTATGGGCGAATTTGCTCAAAAGCTGCATGAGCTATGGGAGAGACAAGATGAGGAACAAAGGCGGAAAATCAGGGCAGAGTATCTAACAAAGGATTTTGAGAAACAACTTAAAGCTTTGCGCACCGAAATGGGAGCCTCAAAACACGAGCATGACAAAGTTTCAGGGAAGAATTCATTGTCGAAGTTCAATTCTGATAGTGGTGTTTCGCCACTGGATGATCTAAAGGTGGATTTAGATTCTATGAAGAAGAGATTGCATGATGAGAGGGCCAAACATAAGGAAGCCATTAGGCTTGTCCGTGATGCAGCTTCTAATAGTTTACAAACTGGTTTGGTTCCCATTTTTAAGACCTTAGAAAGTTTCACTTCAGAGGTGGTGAAAGCTCATGAGGAAGTCAGACTTCAAAATGCTGCAGCCTCGTAG 2724 0.4244 MGCGGSKLEEFPVVTLCRERKNFLKNASDQRYALAAAHLSYLQSLRDIGEALRRFSDQDLFLPTASTPSSSSSISSPVLTLPSREGKSSKNSSNHHDDHDHDDDSHLHLSSGSELSSPSSDHFNHHHEHQTPEAESEPERERDRGFEYGHEPQYEPEPQLEPSSSYGYNYPYPYPYQQDWNQNQNPNPNQAGVNSYAYYMKKSAPRGKSVIYQEPERHVAESGRWTGSPYGYGYNGMNGSAGGFFGFPAGPSTPAPPPPAPAPAPPSPPRVSTWDFLNFFESVDNGYSGYGSYGLGLGLASSGSSPDSKEVREREGIPELEDETEQETVKEVRHEKKKKKVAEEVEKEKAEAVKGGDFGEGTSNSKEVPLQQVSSSEGSSKTVRFHSSEGSGDSISSSEKLSPDNVVPKGSPPRKKGVSFEIEGDEDATVTTVEVDGESSMLSSLSTLSPHGTRDLKEVVREIRDEFETASNHGREVAFLLEVYKPPYQSRLAAFRVIYSRILEMLAPSKPPSHPPSGPPIQFSSRTMKLAKAYCGEPEKELISNPINLSSTLEKLYAWEKKLYKEVKDEERLRAIYEKQCKRLKALDNRGAEATKIDAAESLIRKLLTKINICIKSVETISGRIHKLRDEELQPQLAALINGLIRMWKFMFQCHQKQFQAIMESKTQSLKLNTGLQRDEGLKAIIELERELLNWCTQFNNWVRTQKSYVENLNGWLRRCLHDEPEETDDGVVPYSPSRIGAPQAFIICNDWQQAMNRISERGVADAMGEFAQKLHELWERQDEEQRRKIRAEYLTKDFEKQLKALRTEMGASKHEHDKVSGKNSLSKFNSDSGVSPLDDLKVDLDSMKKRLHDERAKHKEAIRLVRDAASNSLQTGLVPIFKTLESFTSEVVKAHEEVRLQNAAAS* 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2958 907 Pfam Protein of unknown function (DUF630) 1 58 IPR006868 -
Mtr3g2958 907 Coils Coil 331 351 - -
Mtr3g2958 907 MobiDBLite consensus disorder prediction 63 88 - -
Mtr3g2958 907 MobiDBLite consensus disorder prediction 326 355 - -
Mtr3g2958 907 MobiDBLite consensus disorder prediction 120 151 - -
Mtr3g2958 907 MobiDBLite consensus disorder prediction 300 419 - -
Mtr3g2958 907 Coils Coil 838 858 - -
Mtr3g2958 907 MobiDBLite consensus disorder prediction 809 823 - -
Mtr3g2958 907 Pfam Protein of unknown function (DUF632) 456 776 IPR006867 -
Mtr3g2958 907 MobiDBLite consensus disorder prediction 809 828 - -
Mtr3g2958 907 MobiDBLite consensus disorder prediction 250 269 - -
Mtr3g2958 907 MobiDBLite consensus disorder prediction 364 404 - -
Mtr3g2958 907 PANTHER FAMILY PROTEIN, PUTATIVE (DUF630 AND DUF632)-RELATED 1 904 - -
Mtr3g2958 907 PANTHER UNCHARACTERIZED 1 904 - -
Mtr3g2958 907 MobiDBLite consensus disorder prediction 89 109 - -
Mtr3g2958 907 MobiDBLite consensus disorder prediction 63 168 - -
Mtr3g2958 907 MobiDBLite consensus disorder prediction 248 269 - -
Mtr3g2958 907 Coils Coil 567 587 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2958 Mtr-Chr3 43449391 43454928 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2958 1 99 Acyl Lipid Metabolism Gene Families AT2G27090 36.893 1.91e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2958 - - aprc:113852495 1023.85