Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2955 ATGGGATTGAATGGAGATGCATCAAGAGAAGATGATCTAACGATGAGTCCAAGAATAGGATGTTGTTTATGTAGGCATCGAAGCTTAGAAATTTCACGTTTACCTTCTAATTCAATGCCTTCTACGTCAAGAAACAATACAATCAACGACACAAAGATGAACAAACAAAAGAGAAGCAGGAGCGTGGGAAGCTCTGATAATTTTATTCCTACTCCTTCTTCATTGAATAGTAGTATTAGTGGAAATTTGACAATGCCTTCTCGTATGCAGTCAAGAAATGGTAGCTCTCGTAGAAGTGGAACTCCAATAATGTACTCTAATTCATCTGGGAGGTTAAAACCTCCACCAATTGAGAAAAATATTGAATGTACCCTTGATGAATTGTGTCATGGTTGCAAGAAAACGGTCATGATTACAAGAGATGTCCTCACAGATATCGGGGGTGTAGTTCAAGAGGAGGAACTATTAACAATAAATGTACAACCAGGATGGAAGAAAGGAACAAAGATTAAATTTGAAGGAAAAGGGAATGAGAGACCTAATTATGCATACTCAGAAGACATAATATTTTATATATCTGAGAAAAGACATCAATTATTTAAAAGAGAAGGGGATGACTTGGAATTATGTGTTGAAATTCCCTTGCTAAAGGCACTTACAGGATGTACAATATCAGTTCCATTGCTGGGTGGAGAGCATATGGATTTGACACTAGATGAGATCATATACCCCGGCTATCAGAAGATTATTACTGACCAAGGTATGCCAATTTCAACAGAACCAGAGAAGAGAGGAAACTTAAGAATTACATTTCTTGTTGAGTTTCCAACACATCTCACAGATAATCAAAGATCTGATGTTTTTGGTATTTTACAGAATTCTTGTTAG 888 0.3649 MGLNGDASREDDLTMSPRIGCCLCRHRSLEISRLPSNSMPSTSRNNTINDTKMNKQKRSRSVGSSDNFIPTPSSLNSSISGNLTMPSRMQSRNGSSRRSGTPIMYSNSSGRLKPPPIEKNIECTLDELCHGCKKTVMITRDVLTDIGGVVQEEELLTINVQPGWKKGTKIKFEGKGNERPNYAYSEDIIFYISEKRHQLFKREGDDLELCVEIPLLKALTGCTISVPLLGGEHMDLTLDEIIYPGYQKIITDQGMPISTEPEKRGNLRITFLVEFPTHLTDNQRSDVFGILQNSC* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2955 295 SUPERFAMILY HSP40/DnaJ peptide-binding domain 116 197 IPR008971 GO:0006457|GO:0051082
Mtr3g2955 295 MobiDBLite consensus disorder prediction 60 108 - -
Mtr3g2955 295 MobiDBLite consensus disorder prediction 34 113 - -
Mtr3g2955 295 MobiDBLite consensus disorder prediction 34 50 - -
Mtr3g2955 295 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 3 292 - -
Mtr3g2955 295 CDD DnaJ_C 115 279 - -
Mtr3g2955 295 SUPERFAMILY HSP40/DnaJ peptide-binding domain 200 285 IPR008971 GO:0006457|GO:0051082
Mtr3g2955 295 Pfam DnaJ C terminal domain 117 276 IPR002939 -
Mtr3g2955 295 Gene3D - 116 196 - -
Mtr3g2955 295 Gene3D - 197 277 - -
Mtr3g2955 295 PANTHER FAMILY B PROTEIN, PUTATIVE-RELATED 3 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2955 Mtr-Chr3 43416591 43418465 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2955 K09519 - gmx:100782604 350.903