Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2948 ATGGCTCAAACTATGTTACTCATGTCTAGTGTCTCTAGTACTTATTCCGTGGATTTGAAGAAAGACCCTTTGCTTCAATTACAGTGTCAAAGATTAAGGCCTAGGTTTTCTGATGTTTCATTCAACCCACTTCCTTCAAATTCTAAGTGTTTTTCATCACGCACATTCACTACTTTGGCTCTATTCAAATCAAAGACCAAAGCTCCTGCTAAGGTTGTTAAAAAGCCAAAGCCAAAGGTTGAAGATGGTATCTTTGGAACTTCTGGAGGATTTGGTTTCACTAAGCAGAATGAACTCTTTGTGGGTCGTGTTGCTATGATCGGTTTTGCAGCATCAATATTGGGTGAAGCATTAACTGGCAAAGGAATTCTAGCACAATTGAATTTGGAAACCGGAATTCCAATTTATGAAGCTGAGCCACTTCTCCTATTTTTCATCATTTTCACCTTGCTAGGAGCCATTGGAGCTCTAGGTGACCGTGGTAAATTTGTTGATGATGAGCCTAACACTGGAGGAGTTATTCCTCCAGGAAAAGGATTTAGATCAGCTCTTGGTCTCAGTGAAGGAGGTCCTTTATTTGGATTCACCAAATCCAATGAATTGTTTGTTGGAAGATTGGCTCAATTGGGTTTTGTTTTCTCTTTGATTGGAGAAATTATTACTGGAAAGGGAGCTCTAGCTCAGCTCAACATTGAGACTGGGGTCCCAATTACTGAAATTGAACCATTAGTGTTGTTCAATGTTATTTTCTTCTTCATTGCTGCTTTGAATCCTGGAACTGGCACTTTTGTAACAGATGATGAGGAAGATTAG 813 0.3948 MAQTMLLMSSVSSTYSVDLKKDPLLQLQCQRLRPRFSDVSFNPLPSNSKCFSSRTFTTLALFKSKTKAPAKVVKKPKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASILGEALTGKGILAQLNLETGIPIYEAEPLLLFFIIFTLLGAIGALGDRGKFVDDEPNTGGVIPPGKGFRSALGLSEGGPLFGFTKSNELFVGRLAQLGFVFSLIGEIITGKGALAQLNIETGVPITEIEPLVLFNVIFFFIAALNPGTGTFVTDDEED* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2948 270 Pfam Chlorophyll A-B binding protein 89 215 IPR022796 -
Mtr3g2948 270 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 193 255 - -
Mtr3g2948 270 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 1 178 - -
Mtr3g2948 270 Gene3D Chlorophyll a/b binding protein domain 68 134 - -
Mtr3g2948 270 PANTHER PHOTOSYSTEM II 22 KDA PROTEIN, CHLOROPLASTIC 193 255 - -
Mtr3g2948 270 PANTHER PHOTOSYSTEM II 22 KDA PROTEIN, CHLOROPLASTIC 1 178 - -
Mtr3g2948 270 SUPERFAMILY Chlorophyll a-b binding protein 79 248 - -
Mtr3g2948 270 Gene3D Chlorophyll a/b binding protein domain 135 240 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2948 K03542 - gmx:100807355 416.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2948 3 43359460 43361482 Mtr3g2948 3 43359460 43361482 ECH