Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2935 ATGCCGTCACGGTGGCAGTTATTACTTCTCTTCTTACTCTCAACAACAGTCACATCCACAATGCCGGTTCAAACCACCTTTTCTGTAAAGCTGTTTCACCGATTCTCCGAAGAAATGAAACCGGTTCAGGTTCAAACCGGTGACTGGCCAGACCGGCGCACCTTGCACTACCACGAAAAGCTTCTTAGAAACGATTTTCTCAGACACAAGATCAACCTCGGTGGTGCTCGCCACAAGCTTCTGTTTCCTTCTCAAGGTAGCAAAACGATGTCGTTTGGAAATGACTTTGGCTGGTTACATTACACGTGGATTGATATAGGAACACCGAGTACTTCGTTTCTTGTTGCGTTGGATGCTGGGAGTGATCTTCTTTGGGTTCCTTGTGATTGTATACACTGTGCTCCTTTGTCTGCCAGTTTCTATTCCAATTTGGATAGAGATCTGAATGAGTATAGTCCCTCTCGTTCGTTATCCAGCAAGCATCTATCATGCAGCCACCGGTTGTGTGATATGGGTTCAAATTGTAAAACCTCGAAGCAACAGCAGTGTCCGTACACGATTAATTACTTATCAGATAATACATCAAGTTCTGGATTGTTAGTTGAGGATATATTTCATCTTCAATCCGGCGATGGCAGCACATCTAACTCTTCTGTTCAGGCTCCAGTTGTTGTCGGGTGTGGTATGAAGCAAAGTGGCGGTTATTTGGATGGCACTGCTCCGGATGGTCTCATTGGTTTAGGACCTGGGGAGAGTTCAGTTCCAAGTTTTCTTGCTAAATCAGGATTAATTCGTGATTCTTTTTCGTTGTGCTTTAATGAAGATGATTCTGGTAGATTATTTTTTGGTGACCAGGGATCAACCGTGCAACAGTCTACTCCATTCTTGCTCGTGGATGGAATGTTTTCAACCTACATTGTTGGAGTGGAGACCTGTTGTATTGGGAACTCTTGTCCTAAAGTAACAAGTTTTAATGCTCAGTTTGACAGTGGAACATCATTTACGTTTCTTCCTGGTCATGCATATGGAGCAATAGCTGAGGAGTTTGACAAACAAGTAAATGCTACAAGATCTACCTTTCAAGGATCTCCTTGGGAGTATTGTTATGTACCCAGCAGTTCGCAACAGCTGCCTAAGATTCCCACATTGACACTCATGTTCCAACAGAACAACAGTTTTGTGGTCTATAATCCCGTGTTTGTATCTTACAATGAGCAGGGAGTTGATGGATTTTGTTTGGCAATACAGCCAACTGAAGGGGGTATGGGAACAATTGGACAAAATTTCATGACGGGATACCGGTTGGTATTTGATAGGGAAAACAAGAAGCTAGCATGGTCACACTCCAATTGTCAGGATCTCAGTCTAGGTAAGAGGATGCCCCTCTCCCCTCCGAATGGGACATCGTCAAGTCAGCTGCCTGCAGATGAGCAGCAAAGAACCAAAGGGCATGCAGTTGCTCCAGCTGTTGCTGTAAGGGCTCCTCAAAAACCTTCAGTTGCTTCATCTCAGACATCTTATATGATTTCATACTGGCGACATTGGCACTGCCATTGGTTGCTTCTATTTCATCTTCTGTCGGTCTTTTACTAA 1593 0.4401 MPSRWQLLLLFLLSTTVTSTMPVQTTFSVKLFHRFSEEMKPVQVQTGDWPDRRTLHYHEKLLRNDFLRHKINLGGARHKLLFPSQGSKTMSFGNDFGWLHYTWIDIGTPSTSFLVALDAGSDLLWVPCDCIHCAPLSASFYSNLDRDLNEYSPSRSLSSKHLSCSHRLCDMGSNCKTSKQQQCPYTINYLSDNTSSSGLLVEDIFHLQSGDGSTSNSSVQAPVVVGCGMKQSGGYLDGTAPDGLIGLGPGESSVPSFLAKSGLIRDSFSLCFNEDDSGRLFFGDQGSTVQQSTPFLLVDGMFSTYIVGVETCCIGNSCPKVTSFNAQFDSGTSFTFLPGHAYGAIAEEFDKQVNATRSTFQGSPWEYCYVPSSSQQLPKIPTLTLMFQQNNSFVVYNPVFVSYNEQGVDGFCLAIQPTEGGMGTIGQNFMTGYRLVFDRENKKLAWSHSNCQDLSLGKRMPLSPPNGTSSSQLPADEQQRTKGHAVAPAVAVRAPQKPSVASSQTSYMISYWRHWHCHWLLLFHLLSVFY* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2935 530 Gene3D Acid Proteases 76 284 IPR021109 -
Mtr3g2935 530 MobiDBLite consensus disorder prediction 456 478 - -
Mtr3g2935 530 Pfam Xylanase inhibitor C-terminal 325 447 IPR032799 -
Mtr3g2935 530 PRINTS Pepsin (A1) aspartic protease family signature 106 126 IPR001461 GO:0004190|GO:0006508
Mtr3g2935 530 PRINTS Pepsin (A1) aspartic protease family signature 326 337 IPR001461 GO:0004190|GO:0006508
Mtr3g2935 530 PRINTS Pepsin (A1) aspartic protease family signature 423 438 IPR001461 GO:0004190|GO:0006508
Mtr3g2935 530 Gene3D Acid Proteases 285 453 IPR021109 -
Mtr3g2935 530 SUPERFAMILY Acid proteases 95 452 IPR021109 -
Mtr3g2935 530 MobiDBLite consensus disorder prediction 456 488 - -
Mtr3g2935 530 PANTHER ASPARTYL PROTEASES 7 468 IPR001461 GO:0004190|GO:0006508
Mtr3g2935 530 PANTHER ASPARTIC PROTEINASE-LIKE PROTEIN 1 7 468 - -
Mtr3g2935 530 Pfam Xylanase inhibitor N-terminal 101 284 IPR032861 -
Mtr3g2935 530 ProSiteProfiles Peptidase family A1 domain profile. 100 447 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2935 Mtr-Chr3 43214652 43218340 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2935 93 454 Miscellaneous Gene Families AT1G44130 28.608 5.78e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2935 - - mtr:MTR_3g087780 1018.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2935 3 43214652 43218340 Mtr3g2935 3 43214652 43218340 ECH