Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2921 ATGGGAGACATTTCGCCAGAGAGAAAAGCAGGTTGTGGATTAATGACAACAGTATTTGGAAGACGGTCGAAAAAAACATCCTCTGTGGGTTCTGCTCCCATACCAAACAACGTTAATGATCCAAAACGACGACGTGGTGGTTCTAAAGAGGTTGTTTCTGTCGATGCACCTTCACAAAATGTTCCAAACACTTCAACAACTCGTTCTGTTTCCAAGACTTCTTCTTGTTCATCAAATAATAATCCACAGAAAACGACAATGCCACGTGGACCATCAAAGGTTTTAAATTCATCAACTACTGAGGGGTATGTTAATCAAGGTAGGAGGGTTCCAAAAGAAGCTGTTGGTATTTCAGGTGAGTTAGAAAGCATGATCAATGATCATCAAAAATCCAAAGGAAGTAGTACTCTTATTCGCGCTTCGTCTGGCAATGTTATGTTGTATGGAAATTTAGGGAATCTTAGGCAAGGAGATAAAAATAATAGTTATTCAAATGCAATGGATAATTATAACCAGTATTTTGAAAATGCAAATTCAAATGCAAGAGGAGGACACACAAATAATGTGACGAGTGTTCGTAAAGAAACAAAATCATCCACCAAGTTGAAGGAAGAAAAATCAGGTGGTGGTTCACTTTGTAGGGCTATATCAACTAGAATGGATCCAGAGCAGTTGAAAATAATGGGGAATGAGGATTATAAGAATGGAAGATTCGCGGAGGCGTTATCCTTGTATGATGCAGCTATTGCAATTGATCCCAAGACGGCTTCTTATAGAAGTAATAGAAGCGCTGCTTTAACTGCTCTTGGTAGGCTTCTTGAAGCTGTGTTTGAATGTAGGGAAGCTATTCAAATTGATCCTCATTATCATAGAGCTCACCATCGTTTAGGAAATTTGCACTTTAGATTAGGAGAAACAGATAAGGCCCTTTATCATTATAAACAAGCAGGACCCGAGGCTGATCCTGATGAGGTTGCTAAAGTGAAGATTCTTCAAGCTCATTTAAGTAAGTGCACTGAGGCTCGCAGGTTAGGAGATTGGAACACACTAATTACTGAGACCTCCAAAATTCTATCATCCGGTGCAGATTCTGCTCCACAGATATTTGCACTGCAAGCCGAAGCGCTGATAAAACTCCGTAGGCATCAAGATGCAGACAACGTGATGTCAAAGTGTCCTAATTTTGACGTTGATGATTGTACCAAATTCTTTGGACCAATTGGTAATTCAAATTTGTTAGTGACACGAGCTCAAGTTGATATAGCTGCTGGCAGATTTGATGATGCTTTAGAGGCAGCGCAGAAAGCAGCTAGACTAGACCCTAACAACAAGGTAGCAAACAAGGTGTTGAGAAAGGCTCGAGCTGTGACAGCTGCAAGAGGAAGAGGAAACGAGCTTTTCAAGGCATCGAAATTCTCTGAGGCTTGCGTTGCATATGGAGAAGGGCTTGAGCATGATCCATATAACTCTATTTTACTTTGCAACCGGGCAGCTTGTAGATCAAAACTCAGCCAATTGGAGAAAGCAGTTGAAGATTGTACCGCGGCGCTTAACTTACGCCCATCTTACACCAAAGCAAGGTTGAGAAGAGCTGATTGTAATGATAAGATGGAAAGATGGGAAGCTTCAATAGGAGACTATGAAATCTTGTTAAGAGAGACACCAGAAGACGAGGAATTAAATCGAGCATTGTTGGAGGCTCGGGCACAACTTAAGAAACAACGAGGTGGATGA 1734 0.4106 MGDISPERKAGCGLMTTVFGRRSKKTSSVGSAPIPNNVNDPKRRRGGSKEVVSVDAPSQNVPNTSTTRSVSKTSSCSSNNNPQKTTMPRGPSKVLNSSTTEGYVNQGRRVPKEAVGISGELESMINDHQKSKGSSTLIRASSGNVMLYGNLGNLRQGDKNNSYSNAMDNYNQYFENANSNARGGHTNNVTSVRKETKSSTKLKEEKSGGGSLCRAISTRMDPEQLKIMGNEDYKNGRFAEALSLYDAAIAIDPKTASYRSNRSAALTALGRLLEAVFECREAIQIDPHYHRAHHRLGNLHFRLGETDKALYHYKQAGPEADPDEVAKVKILQAHLSKCTEARRLGDWNTLITETSKILSSGADSAPQIFALQAEALIKLRRHQDADNVMSKCPNFDVDDCTKFFGPIGNSNLLVTRAQVDIAAGRFDDALEAAQKAARLDPNNKVANKVLRKARAVTAARGRGNELFKASKFSEACVAYGEGLEHDPYNSILLCNRAACRSKLSQLEKAVEDCTAALNLRPSYTKARLRRADCNDKMERWEASIGDYEILLRETPEDEELNRALLEARAQLKKQRGG* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2921 577 MobiDBLite consensus disorder prediction 1 111 - -
Mtr3g2921 577 MobiDBLite consensus disorder prediction 177 211 - -
Mtr3g2921 577 Gene3D Tetratricopeptide repeat domain 220 576 IPR011990 GO:0005515
Mtr3g2921 577 Pfam Tetratricopeptide repeat 292 322 IPR019734 GO:0005515
Mtr3g2921 577 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 5 575 IPR044534 -
Mtr3g2921 577 ProSiteProfiles TPR repeat profile. 410 443 IPR019734 GO:0005515
Mtr3g2921 577 SMART tpr_5 410 443 IPR019734 GO:0005515
Mtr3g2921 577 SMART tpr_5 456 489 IPR019734 GO:0005515
Mtr3g2921 577 SMART tpr_5 222 255 IPR019734 GO:0005515
Mtr3g2921 577 SMART tpr_5 490 523 IPR019734 GO:0005515
Mtr3g2921 577 SMART tpr_5 524 557 IPR019734 GO:0005515
Mtr3g2921 577 SMART tpr_5 290 323 IPR019734 GO:0005515
Mtr3g2921 577 SMART tpr_5 256 289 IPR019734 GO:0005515
Mtr3g2921 577 MobiDBLite consensus disorder prediction 20 35 - -
Mtr3g2921 577 Pfam Tetratricopeptide repeat 229 288 - -
Mtr3g2921 577 PANTHER OS01G0616333 PROTEIN 5 575 - -
Mtr3g2921 577 MobiDBLite consensus disorder prediction 53 105 - -
Mtr3g2921 577 MobiDBLite consensus disorder prediction 177 195 - -
Mtr3g2921 577 SUPERFAMILY TPR-like 458 573 IPR011990 GO:0005515
Mtr3g2921 577 SUPERFAMILY TPR-like 222 445 IPR011990 GO:0005515
Mtr3g2921 577 ProSiteProfiles TPR repeat profile. 222 255 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2921 Mtr-Chr3 43106620 43109491 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2921 234 526 Glycosyltransferase AT3G04240 21.502 1.16e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2921 - - gmx:100811282 758.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2921 3 43106620 43109491 Mtr3g2921 3 43106620 43109491 ECH