Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2920 ATGGATTCAGGAAATAGTGGAAGTATGCAATCTTCAAGCTGTGGTGATGAAATTGAAGACTATGATTCAAGAGGTGATTCAAATAATTTTTCTGCACTCTTAAACAATCAACAACCACCAACAACAAGAATAAACCATGTTCTAAACACACCATCACATCCTTCTTCTTCTTTACCACAACAACAAATGTTTGATCCATTGGTGAATTATTATATGGATTCATTACAAAAAGCTTCACCATCATCAAACCAAAACCAAAACTCATTTCTAAACCTTGATATGATGTGGGCTAAAGCTACAGGTAGATCTGAACCAAACAATACCGATCTTAGTAGCTTAATGGTACCTTCTTCATCTTCTCAACAGAATCATCAACAACAACAAGCTTTTTTGTTGAGTCAATTAGCAGCTGGTCAAACAAGAGAAAACGTTGCTTCTTCTGTACACACCACACACCAACAACAACACCATTCTCTACCACAAGAAAGTACTTCACGTGGAGGAATATCACTCACCAATGATCAACAAAATCTCAACAATAACAATATGGGAAGAAATCCGAAGAAAAGATCAAGAGCTTCAAGACGTGCACCTACTACAGTTCTCACTACAGATACTACAAATTTCAGAGCCATGGTTCAGGAATTTACTGGTATACCAGCACCACCGTTTTCTTCACCTTTTCCAAGAACAAGATTAGATCTTTTTGGTTCTTCTGTTTCTTCAAGATCTTTGTCTTCTCAGATGGACCCTCCTCCTCTTCATCAAGCACCACCTTATCTTCTTCGACCTTTTGCTCAGAAAATTCAACCTCATTACTCTTTTTCTCAAATCCCTTCTTCTTTTCCATCTTTGGAAAATTCAACTAATTCAGCGTCCATTAACTACCATAATCATCCTCTCATGCAACACAACCAAATTCTCGGTTTTCAATCAATTTCATCATCTCAAGCACCTACAAAATACCCACATGGGGCCCAACAACCCTCCTTGGAAATCTCGCCAAAAATGGGTGTTTTTGAGGAACTAGGATTGAGTCATGCCCATGACCATGTTAACAACAACAACAACAACATTGGTGTTCTTCATCAACAAAACATGGTTCCGGCATCATCATCGGAGAGAGTCAACAACAACATGCGTAATACTACTACTTCAGAGGATCAGTGGGGTCAGAGAACGAGTAGTACTAGTATTAATGGAGACAATGATGGTGGTGGAGGAAGAATTGTTGTTGGGTCTCTGAGTGGCATTCAAGAGAGGAATTCTTCTGCATCAGATTTTGGTGTAGAGAAAGGACAAGAATGTGGTGTAGTAGTGGCTACAACTACAAGAGGTGAAGGTACGGTGGAATCATGGATTAATTGTTCTTCTTCTGATTAA 1383 0.3883 MDSGNSGSMQSSSCGDEIEDYDSRGDSNNFSALLNNQQPPTTRINHVLNTPSHPSSSLPQQQMFDPLVNYYMDSLQKASPSSNQNQNSFLNLDMMWAKATGRSEPNNTDLSSLMVPSSSSQQNHQQQQAFLLSQLAAGQTRENVASSVHTTHQQQHHSLPQESTSRGGISLTNDQQNLNNNNMGRNPKKRSRASRRAPTTVLTTDTTNFRAMVQEFTGIPAPPFSSPFPRTRLDLFGSSVSSRSLSSQMDPPPLHQAPPYLLRPFAQKIQPHYSFSQIPSSFPSLENSTNSASINYHNHPLMQHNQILGFQSISSSQAPTKYPHGAQQPSLEISPKMGVFEELGLSHAHDHVNNNNNNIGVLHQQNMVPASSSERVNNNMRNTTTSEDQWGQRTSSTSINGDNDGGGGRIVVGSLSGIQERNSSASDFGVEKGQECGVVVATTTRGEGTVESWINCSSSD* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2920 460 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 456 IPR039609 -
Mtr3g2920 460 MobiDBLite consensus disorder prediction 141 187 - -
Mtr3g2920 460 MobiDBLite consensus disorder prediction 25 61 - -
Mtr3g2920 460 MobiDBLite consensus disorder prediction 383 403 - -
Mtr3g2920 460 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 456 - -
Mtr3g2920 460 MobiDBLite consensus disorder prediction 1 16 - -
Mtr3g2920 460 Pfam VQ motif 196 223 IPR008889 -
Mtr3g2920 460 MobiDBLite consensus disorder prediction 383 410 - -
Mtr3g2920 460 MobiDBLite consensus disorder prediction 101 127 - -
Mtr3g2920 460 MobiDBLite consensus disorder prediction 141 199 - -
Mtr3g2920 460 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2920 Mtr-Chr3 43083643 43085813 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2920 - - mtr:MTR_3g087390 818.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2920 3 43083643 43085813 Mtr3g2920 3 43083643 43085813 ECH