Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2909 ATGAAAAAGAAACAATCTCTGCGTAACAAAGCCACCAACTTTGTCTCTGTCCTTCTCAACCCCATCTCTGATCCTCCTGATTCTCACAAACACCCTCCACCTTCTTCAGAAGATGTTGGTGAATTAAAAAAAAGTGATGAAGAGGGTAATAATCATGATGTAGTTGATGGGCCTGATACTTCATCATTCACTGCATTTCTCTATTCTTTATGGTCTTCTTCAGACTCTAAAGAGAATGCTAACTCAAATGGAAAAAATGATGATAAAGGTGGACTTGATAATGATAATAGTAGTAGTAGTAATAGTTCTTTACCTGATTCATCCATTAAGGAAAATGGTGGGAGGAAAAGTTTGTTTTCTAGAAGTAAGCAATCAGTTGGTGGAGCTATTCGGCGAGTTGTGAGGATTGGTCGATTTCACCATCAGGGTCGGAAGGATAATAGTAATAATGTTGTTGAAATGAAACTTCAAGATAAGAGGAAAGAATCAGTGCCTGTGAAAGAAAAATCGTCGTCTGTGGCTTTGGATGATATGCCAGGAATTTCTGAACCTTCGGTTCTTGTTTCAAAGAGCATAAGGAATGTTCTCTATGCTTCTCTTCCGCCTCTAATGCATGGAAGAAAATGGCTGTTGCTATACAGCACTTGGAGGAATGGTATATCACTTTCAACTCTTTACCGGAGAAGCATGTTATGGCCTGGATTGAGTTTGCTGGTTGTTGGAGATAAAAAAGGAGCAGTATTTGGCAGCTTGGTTGAAACACCTCTCAAACCATCCAGCAAGAGAAAATACCAGGGAACTAACAGTACATATGTTTTCTCAAATATCTCTGGTCGTCCTATCATATATCATCCAACAGGGGTAAACCGTTATTTCACACTTTGCAACACTGACTACATAGCAATTGGTGGGGGAGGTCATTTTGCGCTTTATTTGGACGGTGATCTATTGAATGGCTCAAGTTCGGTATCAGAAACTTTCGGGAATCCCTGCCTTGCAAATTCTCAGGACTTTGAAGTGAAGGAAGTAGAGTTATGGGGCTTTGTACACACTTCAAGTTATGATGAAGTGCTTGCGTTGAGCAGAACTGAGGCGCCAGGGATCAGTCGATGGTGA 1116 0.4059 MKKKQSLRNKATNFVSVLLNPISDPPDSHKHPPPSSEDVGELKKSDEEGNNHDVVDGPDTSSFTAFLYSLWSSSDSKENANSNGKNDDKGGLDNDNSSSSNSSLPDSSIKENGGRKSLFSRSKQSVGGAIRRVVRIGRFHHQGRKDNSNNVVEMKLQDKRKESVPVKEKSSSVALDDMPGISEPSVLVSKSIRNVLYASLPPLMHGRKWLLLYSTWRNGISLSTLYRRSMLWPGLSLLVVGDKKGAVFGSLVETPLKPSSKRKYQGTNSTYVFSNISGRPIIYHPTGVNRYFTLCNTDYIAIGGGGHFALYLDGDLLNGSSSVSETFGNPCLANSQDFEVKEVELWGFVHTSSYDEVLALSRTEAPGISRW* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2909 371 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 1 364 - -
Mtr3g2909 371 SMART 109ultra 185 349 IPR006571 -
Mtr3g2909 371 ProSiteProfiles TLDc domain profile. 186 349 IPR006571 -
Mtr3g2909 371 PANTHER TLD-DOMAIN NUCLEOLAR PROTEIN 1 364 - -
Mtr3g2909 371 MobiDBLite consensus disorder prediction 30 54 - -
Mtr3g2909 371 MobiDBLite consensus disorder prediction 74 124 - -
Mtr3g2909 371 Pfam TLD 211 348 IPR006571 -
Mtr3g2909 371 MobiDBLite consensus disorder prediction 93 124 - -
Mtr3g2909 371 MobiDBLite consensus disorder prediction 1 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2909 Mtr-Chr3 42994946 42997888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2909 208 352 EF-hand Containing Proteins AT5G06260 29.032 4.72e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2909 - - gmx:100804124 484.567