Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2900 ATGGGTAGTAGCAGATGGTTCAGCTTCACAACATTGTGTAACTGGTGGTTCCGTTACTCCTTCTCTAAATCCGGCCTAAAATCAACCACCACCGATCTCGGCGACGGAACAGTAATGCATTGTTGGGTTCCCAAAACAGCTCAAAAACACAAACCTTCTCTTATTCTCATCCATGGAATCGGAGCCAACGCAATGTGGCAATGGAACTCTTTCATTCCTGAGCTCACACACCACTTCAATGTTTACGTACCAGACTTGCTTTTCTTTGGAGATTCTTACACGACCAGACCTGAAAGATCGGAGCAGTTTCAAGCAAAGTGTGTTATGCGTGTGCTGGAGGGTCATGGGGTGAGGGGGATGATGGTGGTTGGTTTGAGTTATGGTGGGTTTGTGGGGTATAGTATGGCGGCAATGTTTCCGGAGAAGGTGGAGAAAGCGGTGGTGATTTGTGCTGGTGTTTGTTTGGAAGATAGGGATATGGATGATGGGATGTTTCAAGTGAAAAGTGTTGATGAGGCTGTTGATGTTTTGTTGCCGCTGACGCCGGAAATGATGAAGGAGTTGGTGAAGCTCACTTTTTTTAAGCCTGTTAAAACCTTGCCTAATTGGTTTCTTAATGATTTCATTGAAGTGATGTGTATAGAGTACCGCCAGGAGAGGAAAGAACTAATCCAAGCACTACATAAGGATAGAAATTTGTCTAATCTACCTAAGATTACACAGCCTATGCAAATTATATGGGGAGAACATGACCGTGTATTCCCATTGGAATTAGCCCACAGATTGAAACGACATGTGGGAGAGAAGGCACAGCTAGTGGTAATTGAAGATGCAGGGCATGCAATAAACGCAGAGAAACCTAAAGAAATGTACAAGAATTTGAATTCCTTCCTCATTCATCCCTTCACAGGGTCTAAGCAAGAAAACCATAGCAATGGTTACAAGTTTGAATAG 954 0.4361 MGSSRWFSFTTLCNWWFRYSFSKSGLKSTTTDLGDGTVMHCWVPKTAQKHKPSLILIHGIGANAMWQWNSFIPELTHHFNVYVPDLLFFGDSYTTRPERSEQFQAKCVMRVLEGHGVRGMMVVGLSYGGFVGYSMAAMFPEKVEKAVVICAGVCLEDRDMDDGMFQVKSVDEAVDVLLPLTPEMMKELVKLTFFKPVKTLPNWFLNDFIEVMCIEYRQERKELIQALHKDRNLSNLPKITQPMQIIWGEHDRVFPLELAHRLKRHVGEKAQLVVIEDAGHAINAEKPKEMYKNLNSFLIHPFTGSKQENHSNGYKFE* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2900 317 PRINTS Epoxide hydrolase signature 78 93 IPR000639 GO:0003824
Mtr3g2900 317 PRINTS Epoxide hydrolase signature 122 135 IPR000639 GO:0003824
Mtr3g2900 317 PRINTS Epoxide hydrolase signature 136 149 IPR000639 GO:0003824
Mtr3g2900 317 PRINTS Epoxide hydrolase signature 241 257 IPR000639 GO:0003824
Mtr3g2900 317 PRINTS Epoxide hydrolase signature 275 297 IPR000639 GO:0003824
Mtr3g2900 317 PANTHER SI:DKEY-122A22.2 3 307 - -
Mtr3g2900 317 Pfam alpha/beta hydrolase fold 52 287 IPR000073 -
Mtr3g2900 317 PANTHER ALPHA/BETA FOLD HYDROLASE 3 307 - -
Mtr3g2900 317 PRINTS Alpha/beta hydrolase fold signature 78 93 IPR000073 -
Mtr3g2900 317 PRINTS Alpha/beta hydrolase fold signature 122 135 IPR000073 -
Mtr3g2900 317 PRINTS Alpha/beta hydrolase fold signature 136 149 IPR000073 -
Mtr3g2900 317 PRINTS Alpha/beta hydrolase fold signature 243 257 IPR000073 -
Mtr3g2900 317 Gene3D alpha/beta hydrolase 17 299 IPR029058 -
Mtr3g2900 317 SUPERFAMILY alpha/beta-Hydrolases 26 298 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2900 Mtr-Chr3 42913012 42914498 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2900 - - gmx:100812690 471.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2900 3 42913012 42914498 Mtr3g2900 3 42913012 42914498 ECH