Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2884 ATGGGACTTGTTTTTACCAAATGGGCATTCATTTTTTTACTGTGTTGTTCTTGCATCACCTCTATAGTATATTCAGTGGACGGGTTACATGGTGGATCTAAAGTTAGAGGAGTGAACTTAGGAGGGTGGCTTGTTATTGAAGGTTGGATCAAACCTTCTTTGTTTGATGGCATTGCCAATGGAGACATGCTTGATGGGACAGAAGTGCAGCTTAAGTCAGTGAAATTGCAGAAGTATGTATCTGCAGACAATGGGGGAGGAATGAATGTGACAGTTGATAGGGATGCCCCATCTTCATGGGAAACATTCAGATTGTGGAGAGTATCTGAATCTGAATTTCAATTCCGTACCAATCAAGGCCCATTTCTTACATGTGATGGTGGAGGCTGCACTGTCTCTGCAACAGCAAAATCACCTTCAACGTCTGAGATATTTGAAGTTAAGCGTAACGAGAAAAATAAGGTTCACATCAAGATAAAGGATGGACCCTATCTGCAGGCTACAACTGGTAATCAGCTCACAGCAGACTATCCAGGCGTACCCGGATGGGATGATAATTCAGCCACATTTGAAATGACCATTGTATCAAATAACCTACATGGAGATTACCAGCTAGCAAATGGTTATGGACATGAGAGTGCAGAAGATGTTCTTAGGAGACATAGAAATAGCTATATTACAGTAGAGGATTTCAAATTTCTATATGAGCATGGAATAAATACTGTGAGGATACCGGTTGGGTGGTGGATTGCTTTTGATCCTGATCCTCCAAGTCCATTTATTGGAGGAAGTCTTGAAGCTCTAGATAATGCATTTTCATGGGCACAAGAATATGATATAAAATGCATTATTGACCTTCATGCTGCTCCTGGTTCCCAAAATGGAATGGAGCATAGTGCAAGCAGAGATGGATTTACAGGCTGGCCAACTTCTCCAGATTACATTTCAAAGTCATTACATGTTATTGACTTTTTAATTTCTAGATATGCAAAGCATCCTGCCTTGCTGGGAATTGAGCTTTTGAATGAACCATCAGCTGGCACAGTTTCTTTAGATATTTTAACTTCGTATTACAAGCAAGGCTACCAAATCGTTCGGAAATATTCATCGTCAGCTTATGTGATAATGTGCCAAAGAATTGGCAATGCGGATCCTTTGGAGCTTTATCAAGCCGACATAGGATCTACCAACTTAGTTTTGGATTTGCATTTCTACAACCTCTTTGACACATTCTTTGTTAATATGAGTGCTGGTGATAATGTGCAATACATATACAAAAGTCGGGAAGGTCTGTTGCAGGCCTTCAACAATTCAAATGGCCCACTCATTTTTGTTGGAGAGTGGGTGAATGAGTGGGATGTGACAAGCGGATCTCTAACAGATTATCAGGACTTTGGAAAGGCACAGTTAGATGTCTATAATACAGCTTCATTTGGTTGGTGTTATTGGACTTTAAAAAATGACAGGGATCACTGGGATTTTGAATGGAACATTAGGAACAACTATCTTCAATTAGGTAACTCACCCAACAATCAGAACATACACACTTTGGGACTGTCTGGATTGGCTTTCACCTTGTTTTATCTTCCTCACTTTTTGTGA 1602 0.4014 MGLVFTKWAFIFLLCCSCITSIVYSVDGLHGGSKVRGVNLGGWLVIEGWIKPSLFDGIANGDMLDGTEVQLKSVKLQKYVSADNGGGMNVTVDRDAPSSWETFRLWRVSESEFQFRTNQGPFLTCDGGGCTVSATAKSPSTSEIFEVKRNEKNKVHIKIKDGPYLQATTGNQLTADYPGVPGWDDNSATFEMTIVSNNLHGDYQLANGYGHESAEDVLRRHRNSYITVEDFKFLYEHGINTVRIPVGWWIAFDPDPPSPFIGGSLEALDNAFSWAQEYDIKCIIDLHAAPGSQNGMEHSASRDGFTGWPTSPDYISKSLHVIDFLISRYAKHPALLGIELLNEPSAGTVSLDILTSYYKQGYQIVRKYSSSAYVIMCQRIGNADPLELYQADIGSTNLVLDLHFYNLFDTFFVNMSAGDNVQYIYKSREGLLQAFNNSNGPLIFVGEWVNEWDVTSGSLTDYQDFGKAQLDVYNTASFGWCYWTLKNDRDHWDFEWNIRNNYLQLGNSPNNQNIHTLGLSGLAFTLFYLPHFL* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2884 533 PANTHER FASCIN 11 512 IPR010431 GO:0007015|GO:0051015
Mtr3g2884 533 ProSitePatterns Glycosyl hydrolases family 5 signature. 336 345 IPR018087 GO:0004553|GO:0005975
Mtr3g2884 533 PANTHER - 11 512 - -
Mtr3g2884 533 SUPERFAMILY Actin-crosslinking proteins 69 183 IPR008999 -
Mtr3g2884 533 Pfam Cellulase (glycosyl hydrolase family 5) 223 488 IPR001547 GO:0004553|GO:0071704
Mtr3g2884 533 Gene3D - 47 187 - -
Mtr3g2884 533 Gene3D Glycosidases 188 514 - -
Mtr3g2884 533 SUPERFAMILY (Trans)glycosidases 34 504 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2884 Mtr-Chr3 42756752 42761668 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2884 - - gmx:100809472 951.429