Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2880 ATGAAGAAGAAACTGAAAGAGATGATAGGCATAATGAAGGACAAAGCATCACAAAGCAAAGCTGCAATTTTATCAAAAACCAAAACTCTTTCCCTCCTTCGCGCCACGACACACGATTCTTACAACCCTCCAAAACACAAACACCTCTTGACTCTTCTTTCCTCTGGAGACGGTTCACGTGCCACCGCATCCTCTGCGGTGGAGCTTCTCATGGACCGTCTCCAAACCACTCATAACTCAGCAGTAGCCCTTAAATGTTTAATCTCCGTTCACCACATTGTCAAACATGGCACGTTCATCCTCCGTGACCAGCTCTCCGTTTACCCTTACACTGGTGGTAGAAACTACCTCAACCTCTCTAACTTCAGAGACAAAACAAGTTCAATATCTTGGGAACTCTCTTCTTGGGTTCGATGGTACGCGGAATACATTGAAAACCTTCTGTGTACTTCTAGAACTCTTGGTTTCTTCCTCGGTGAAACGACGCCAGAGAAAGGAGTTTCTTATCTTACCAATAGTGATCTGTTAAGAGAAACTGATTCTTTGTTGGCCTTGATGGAAGGAATTGGGAAAAAACCTAATACTCCAATGAGTGAACAGAACAAGGTGGTTGTTGAGATAATGGATTTGGTGGAAGATGATGGGGTTATGGTGATGAATGAAGTTTTGGTTAGAGTTAATGAATTTGGGGAGAGGGAGAAACTGGGCTGTCTTGGTTTTGGAGAAGTGGTGGAATTGGTTTGTGTTTTGAAGAGATTGGAAATGTGCAGAGAGAGAATAATGATGATGGAGGTGGTTGAGGAGAAGAAATTCTGGGATTTGGTGAGAGAATTGAAGGAAAAGGTTGGGAGGATGAAGGTGTATAGAGAAGAAGGGAAGCTTAACAGGACAGTGACAAAAGACAGAAGAACCGAGTCTGATCGGTTTGATGACAGAGTTCTTAGGTCTGTTGATTCCATTAGGTTTCCTTCTTCAAGGTTCTTGTAA 987 0.4286 MKKKLKEMIGIMKDKASQSKAAILSKTKTLSLLRATTHDSYNPPKHKHLLTLLSSGDGSRATASSAVELLMDRLQTTHNSAVALKCLISVHHIVKHGTFILRDQLSVYPYTGGRNYLNLSNFRDKTSSISWELSSWVRWYAEYIENLLCTSRTLGFFLGETTPEKGVSYLTNSDLLRETDSLLALMEGIGKKPNTPMSEQNKVVVEIMDLVEDDGVMVMNEVLVRVNEFGEREKLGCLGFGEVVELVCVLKRLEMCRERIMMMEVVEEKKFWDLVRELKEKVGRMKVYREEGKLNRTVTKDRRTESDRFDDRVLRSVDSIRFPSSRFL* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2880 328 CDD ANTH_N_AP180_plant 30 151 - -
Mtr3g2880 328 PANTHER CLATHRIN ASSEMBLY PROTEIN 4 328 IPR045192 GO:0048268|GO:0072583
Mtr3g2880 328 ProSiteProfiles ENTH domain profile. 20 158 IPR013809 -
Mtr3g2880 328 SUPERFAMILY ENTH/VHS domain 31 156 IPR008942 -
Mtr3g2880 328 Pfam ANTH domain 31 188 IPR011417 GO:0005543
Mtr3g2880 328 Gene3D - 3 157 IPR008942 -
Mtr3g2880 328 PANTHER CLATHRIN ASSEMBLY PROTEIN 4 328 - -
Mtr3g2880 328 SMART enth_2 26 158 IPR013809 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2880 Mtr-Chr3 42727760 42729049 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2880 - K20043 gmx:100808393 380.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2880 3 42727760 42729049 Mtr3g2880 3 42727760 42729049 ECH