Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2872 ATGGCGGAGCTCCGTCACTCCTCCTCACTCGGCGCCCGAGCCACTTCTTCTCCGATGAAACGCGACGGCGATTCCTCCCCTCTCATTCCCGACAACGACCTCTCCGACGATCGCCACTCTCCCAAAGACCGTGACCGTCCTCCCTGCTCGCATTTTCATCACCTTTGTTCTTTCTTCACCGACGACCCTAGGGTTTCTCTTCACAACTCCAAGATCTCTATATTCCTCGTCTCACTTCTAATTCTCGCTGGCGTAATCTCCGTTTTTACCATCCTCAACAAATTGAATTCACCTTACTTGTGTAAAAAAGATGGGATTGTTCTTCACTGCCCTCATGTTAAAGAATCGGCATCTCTTTGGGAAAATCCTTACTCATCCACAACGTCGTGGAAGCCGTGTGCTGAGCGCAGGGATGGTGCCATATCAGATCTTCCTCATGAAAATGAAACAAATGGCTATATATTCATTCACGCTGAAGGTGGTCTAAATCAGCAAAGAATTGCGATATGCAATGCAGTGGCTGTTGCGAAAATAATGAATGCCACTCTTATTTTGCCTGTATTGAAACAGGACCAGATTTGGAAAGACCAAACGAAATTTGAAGACATTTTTGACGTGGATCACTTCATTGACTACCTAAAGGATGATGTCCGTATTGTCCGTGATATCCCAGAATGGTTTACCGATAAAGCAGAGCTATTTTCTAGTATAAGACGTACTGTGAAGAACATCCCAAAATATGCACCTGCACAATTTTACATCGACAATGTTCTGCCCCGCGTCAAGGAGAAAAAGATCATGGCTCTGAAACCTTTTGTTGATAGGCTTGGATATGACAATGTCCCATCAGAAATCAACAAGTTGAGATGTAGGGTCAATTATCACGCTCTGAAATTTCTTCCTGATATAGAGCAGATGTCTGATTTACTTGCATCAAGGATGAGAAACCGAACAGGCAATTCAAATCCTTATATGGCACTGCATCTTAGATTCGAAAAAGGAATGGTCGGCCTATCATTTTGTGATTTTGTGGGGACAAGAGATGAGAAAGCTATAATGGCAGAGTATAGAAAAAAGGAGTGGCCTCGACGGTATAAGAATGGTTCCCACTTGTGGCAATTGGCTCTGCAGAAGCGAAAGGAAGGACGATGCCCTCTAGAGCCTGGAGAAGTGGCTGTTATTCTTCGGGCTATGGGCTATACGAAGGAAACTCAAATTTATGTTGCTTCTGGACAAGTTTATGGTGGTCAAAACCGGATGGCTCCCCTAAGGAATATGTTCCCTAATCTGGTCACAAAGGAGGAATTGGCTACTAAAGATGAGTTAGATGGTTTCAGAAAGCACGTGACTAGCCTTGCAGCTCTTGATTTCTTGGTGTGCTTGAAGTCAGATGTATTTGTGATGACCCATGGAGGTAACTTTGCTAAGCTGATCATTGGTGCCCGCAGATATATGGGCCACCGTCTAAAATCAATAAAGCCCGACAAAGGACTAATGTCCAAGTCTTTTGGGGATCCGTACATGGGTTGGGCTCCTTTTGTAGAAGATGTTATTGTTACTCACCAGACACGGACGGGATTGCCAGAAGAGACTTTCCCTAACTACGACCTGTGGGAGAATCCTCTGACACCTTGCATGTGTAGAGCCTGA 1650 0.4479 MAELRHSSSLGARATSSPMKRDGDSSPLIPDNDLSDDRHSPKDRDRPPCSHFHHLCSFFTDDPRVSLHNSKISIFLVSLLILAGVISVFTILNKLNSPYLCKKDGIVLHCPHVKESASLWENPYSSTTSWKPCAERRDGAISDLPHENETNGYIFIHAEGGLNQQRIAICNAVAVAKIMNATLILPVLKQDQIWKDQTKFEDIFDVDHFIDYLKDDVRIVRDIPEWFTDKAELFSSIRRTVKNIPKYAPAQFYIDNVLPRVKEKKIMALKPFVDRLGYDNVPSEINKLRCRVNYHALKFLPDIEQMSDLLASRMRNRTGNSNPYMALHLRFEKGMVGLSFCDFVGTRDEKAIMAEYRKKEWPRRYKNGSHLWQLALQKRKEGRCPLEPGEVAVILRAMGYTKETQIYVASGQVYGGQNRMAPLRNMFPNLVTKEELATKDELDGFRKHVTSLAALDFLVCLKSDVFVMTHGGNFAKLIIGARRYMGHRLKSIKPDKGLMSKSFGDPYMGWAPFVEDVIVTHQTRTGLPEETFPNYDLWENPLTPCMCRA* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2872 549 CDD O-FucT_plant 153 488 IPR024709 -
Mtr3g2872 549 MobiDBLite consensus disorder prediction 1 46 - -
Mtr3g2872 549 PIRSF UCP009360 36 549 IPR024709 -
Mtr3g2872 549 MobiDBLite consensus disorder prediction 31 46 - -
Mtr3g2872 549 PANTHER O-FUCOSYLTRANSFERASE 2-RELATED 1 549 - -
Mtr3g2872 549 PANTHER PROTEIN PECTIC ARABINOGALACTAN SYNTHESIS-RELATED 1 549 - -
Mtr3g2872 549 Gene3D - 291 492 - -
Mtr3g2872 549 Pfam GDP-fucose protein O-fucosyltransferase 153 485 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2872 Mtr-Chr3 42681317 42688650 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2872 119 548 Miscellaneous Gene Families AT1G22460 35.255 6.82e-92 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2872 - - gmx:100809112 1020.38