Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2861 ATGAAACGTAGCCATGCCGCGACGGAGTCATTTCTCCCCTCCGGTCTAAAATCCGAAAAGCTCAGCCTCCCATCACTTCAATCAAAGATGAAATGCGACCCTGAAGGCTACGAATCCGAACTCCTCTTAATCCGCAGCCAATTCAACTCCTCCCTTGAACTCTTCCAACAACAATCCGCCATGAACTTCACTTCCATTTCCGGCATCTCCAACGATCCCACCGTCGCCAAAGATCTCGCTGATAAAGCCATGTTCCTCTCTCATCTCACCTCCTTTTACCCTCAACACCTCTCTCAATTCCCTAACAAACTCGCTGAGTTGCTTCGTTGCGCTGCTCGAACACTTCCTTCTGGGCTTCGTAACGATTTAGCCAATTCTCTTATCCTTCTTGTTAATCGAGAGATTGTTACTATTAAAGATACGCTTTCGTTGTTTATGGAGCTTCAAACGTTAGGTGATAAAAAGCTGAGGGAGTTGACGTTTGCGCACGTTGTTAAAAGCATAAAACGTATGAACCAAAAACATAAGGATGAAGCCAAAAACCGTGCCCTTCAGAACATTCTTTTTGTCATGTTGCAGCAAGAGGATGAAGACCGGGCCAAGAGGGCGCTTGTGACACTTTGTGAGCTTCACAAGAGACGAACATGGTTTGATGAGAGAACAGCAAATGCAATTTGCACTGCTTCCTTCCATCCATCGTCAAGAATCATGATATCAACATTATGCTTTCTGCTTGATTATGAGAAGATTGAAAACTACCAAGATAGTGATGATGAAAGCAGTGATGAGGAAGCAACCGAATCACCTCAAGTTATTCTTAGAAGGGAGACGGTTTACAAGGCAAGCCACCAAGGTACATCAGCTAGCAAAAAGAAAAAGAAAAGGCAATTAGACCGCATAATACGTAACATGAAAAAGAAAGAGCGCGGATCATCTGAAAGGAAGAGTAACATCTATTACTCACCACTCAACCATCTGAAAGATCCACAGGGTTTTGTGGAGAAGCTGTTCTCACGTCTGCAGAAATGCAATGAACGATTTGAGGTCAAGATGATGATGTTGAAAGTGATAGCTCGAACAATTGGGCTTCACCAGTTAATGTTGTTAAACTTTTACCCTTATCTTCAGAAATATATCCAGCCCCATCAACGAGACGTTACAAATTTGATTGCAGCAGCGGTTCAGGCTTGCCATGATATGGTTCCTCCTGATGCAGTTGAACCCTTGTTCAAACAAATTGTAAATCAATTTGTACATGACCGCTCACGTCCAGAGGCTATCACTGTTGGAATAAATGCAGTCAGGGAGATATGCCTGCGTATGCCACTGTTAATGAGTGAAGACCTACTTCAAGACCTTGCTCTATATAAGAAGTCACATGAGAAAGGAGTTTCAATAGCAGCTCGATCTCTGATTACATTATTCCGAGAGGTTTGCCCTTCACTGCTAATTAAGAAGGACCGAGGGAGGCCTACTGACCCCAAGGCAAAACCAAAGGCTTATGGAGAAGTCAATGTTGCGGCTGACGTTCCTGGTGCTGAGTTGTTACAGATTATTGATGATGATGTTGAGCAGGAGAGTTCTCATTCTGATGACTGTGGTTCAGACAATGCGCAGGAAGATGATCAGGTAAGTTTAAATTCTGATGATGACAACCAGCTAGGCAGTGATAATACCGGAAGTGATGATGATGAAGCCGAAGATCATGATGGTGTATCAGACGATGAAAACGATAGAAGTTCTGATTACGAAACCAGTGGTGATGATGCTGATAATGTTGAAGACGAGGGGGATGATCTAGAAGACAGTGAAGAGGATGGTGGGATTTCGGAACATGAAGGAGATGGTGATCTGCATATTCTTGGAAGTGTGGATACAAAAACTACGTTGAAAGACTTGGCAAAAAAGAGGAAGTTTAGCGATTTCAATGATCAACTTACAGCTGCAGATTCAAGTCTCCGGGCTTTGAAGAAGTTGGCAGGGACAACAATGGAGAATGCCCTGCCAGAAAATGAAGATGGAATTCTTTCCAATGCAGACTTTCAGAGGATCAAGGAACTAAAGGCCAAAAACGAAGCAAGAACTGCATTAGCACAGCATGGGCTTTTAAAGTCATCAACAAATAAGATTCCAAGCTCTGATCAACTAGGTTTAAAGCGAGTGGATGGTTCCATGCTTGAAGCTCATGTAAAGAAAAAGCTTAACAAGGAGGAGAGGTTGGCGATGGTTAGAGCAGGGAGGGAGGAAAGAGGACAGTACCATGCTCGAGCAGCTGTAAAACAGAGAAAGACGGGTGGTCTAAGTAACAAACAAAAGGAACACAAGAAACAAATGCCGATGGTTGCAAAGAGAAAGAAGGTGGCAAGAACTAAGATAGAGAAAAGGATAAAACAGTCGCGGTCTGGTAAACAACAACGTGGGAGGAAAGCGTGGAAATAG 2439 0.4338 MKRSHAATESFLPSGLKSEKLSLPSLQSKMKCDPEGYESELLLIRSQFNSSLELFQQQSAMNFTSISGISNDPTVAKDLADKAMFLSHLTSFYPQHLSQFPNKLAELLRCAARTLPSGLRNDLANSLILLVNREIVTIKDTLSLFMELQTLGDKKLRELTFAHVVKSIKRMNQKHKDEAKNRALQNILFVMLQQEDEDRAKRALVTLCELHKRRTWFDERTANAICTASFHPSSRIMISTLCFLLDYEKIENYQDSDDESSDEEATESPQVILRRETVYKASHQGTSASKKKKKRQLDRIIRNMKKKERGSSERKSNIYYSPLNHLKDPQGFVEKLFSRLQKCNERFEVKMMMLKVIARTIGLHQLMLLNFYPYLQKYIQPHQRDVTNLIAAAVQACHDMVPPDAVEPLFKQIVNQFVHDRSRPEAITVGINAVREICLRMPLLMSEDLLQDLALYKKSHEKGVSIAARSLITLFREVCPSLLIKKDRGRPTDPKAKPKAYGEVNVAADVPGAELLQIIDDDVEQESSHSDDCGSDNAQEDDQVSLNSDDDNQLGSDNTGSDDDEAEDHDGVSDDENDRSSDYETSGDDADNVEDEGDDLEDSEEDGGISEHEGDGDLHILGSVDTKTTLKDLAKKRKFSDFNDQLTAADSSLRALKKLAGTTMENALPENEDGILSNADFQRIKELKAKNEARTALAQHGLLKSSTNKIPSSDQLGLKRVDGSMLEAHVKKKLNKEERLAMVRAGREERGQYHARAAVKQRKTGGLSNKQKEHKKQMPMVAKRKKVARTKIEKRIKQSRSGKQQRGRKAWK* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2861 812 SUPERFAMILY ARM repeat 83 500 IPR016024 -
Mtr3g2861 812 PANTHER PROTEIN SDA1 HOMOLOG 19 812 - -
Mtr3g2861 812 MobiDBLite consensus disorder prediction 523 620 - -
Mtr3g2861 812 Pfam NUC130/3NT domain 85 136 IPR012977 -
Mtr3g2861 812 MobiDBLite consensus disorder prediction 746 812 - -
Mtr3g2861 812 MobiDBLite consensus disorder prediction 587 611 - -
Mtr3g2861 812 MobiDBLite consensus disorder prediction 777 793 - -
Mtr3g2861 812 MobiDBLite consensus disorder prediction 556 572 - -
Mtr3g2861 812 Coils Coil 290 310 - -
Mtr3g2861 812 PANTHER HSDA/SDA1-RELATED 19 812 IPR027312 GO:0000055|GO:0042273
Mtr3g2861 812 Pfam SDA1 445 809 IPR007949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2861 Mtr-Chr3 42558291 42565062 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2861 K14856 - gmx:100816774 1137.48