Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2847 ATGGCTTCGTATTCAGAACAAGATGGAAAGCCTCTACCCAAATTTGGGGAATGGGATGTAAATGATCCATCCTCAGCTGAAGGGTTTACTGTTATATTCAATAAAGCTAGAGATGACAAGAAAATTGCTTCTGCATCTGGAAGATTTCCTTCACAACGACGATATGACTCTCGCACCGGTCGCACCAACGATAATAATAAAAATTTAAAGGCTTCCTCAAAGAAAAAATGGCTTTGCTTTGGCGCTTAG 249 0.4016 MASYSEQDGKPLPKFGEWDVNDPSSAEGFTVIFNKARDDKKIASASGRFPSQRRYDSRTGRTNDNNKNLKASSKKKWLCFGA* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2847 82 MobiDBLite consensus disorder prediction 54 70 - -
Mtr3g2847 82 PANTHER PROTEIN NOI4 6 60 - -
Mtr3g2847 82 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 6 60 IPR040387 -
Mtr3g2847 82 MobiDBLite consensus disorder prediction 43 70 - -
Mtr3g2847 82 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 7 41 IPR008700 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2847 Mtr-Chr3 42434752 42436179 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2847 - - mtr:MTR_3g086160 138.272