Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2842 ATGGCTGAATCTTCAACTTGTTTCGTTCAATCCTTCTCCACTCATGCAGATACTAGTAGTTGCGTAACCAATGAGGGTAACCCTCTTCGTGCTCTTGGAGAATCTATATCTTTTGGGAGGTTTATGTCAGAAAGCTTGGATTGGGACAGATGGTCGGCATTTTCGCAGAACCGTTATGTTGAGGAAGCTGAAAAATATTCCAAACCGGGTTCTGTTGCTGCCAAAAAAGCATACTTTGAGGCTCATTACAAGAGAAAGGCTGAGGAGAAAGCAGCTGCGTTGGTCGAAGAAACAAATATTCAAGCTAATGGAAGTTTTGATTCGGAAAATTGGGAAGGAAACTGCATTGGTTCATCCGCTAAGATAAAGTCAGAAGCTGACAACATTGAGACAACCAATGAAGAGATAAAGAAAGATACAGTTGATTACCAAGTTGTCGATTGCGATGATACCACCCAATTTAATTGTGATGATGTTGGACAAAGTGATTTGGAGATAAAGTCAGAAGCCGACAATATGGAGATAACCAAGGAAGAGATAAATGAAGACATTGTCGATTGCCATGCTGTTCATTGTGATGATATAATCCAATGTAAATGTGATGCTGGAGAAAATGATTTAGACATTGTTGAGGTGGAAGGTGCGGAGGACGTCCTACAACCTTGCAATGATATGAGTCTTAATGCGGAAAGTTGCATGTTCGTTGATAATTCTAATCAGCTTGATCATGATGAAGTCCATAAGAATATTACCATCGCCATTGAAGAAAAGGCGCCTGATCCTGGCATTCCTAGTCAGGAAGTTTTGGCTTTGCCGGTCAAGGGAGGAGAAGTAAATTCTTCTCCAAAATTATCAGCCAAAACTAGACCTGAGAAACCGCCTCTTACCTGTGATCAAAGGAAGGCTTCTGCCGCTGTATCACCTAGAATTGGAATAATCAATGGTTCGAAACGTGATCAAAGGAAGGCTTCTGCCGCTGTATCACCTAGAATTGGAATAATCAATGGTTCGAAACGTGAGAACTCTGTTGGAGACGCAGTTGTAAAGAAGAGACTAACAGCACGGTCACTCCACACGTCAATCAATCTTCCTTCTGGCACCGCTGAAACAAGAAAAACAGCTGACTCACCTTTACGATCCAGAAATGGTACAAACAGGTTTTCAGCAAGTAAGAACTCTGTTGGAAGCTTAGTTGAGAAGAAGAGATTGACTGCATCATCACTTCACATGTCAATCGATGTTCCATCTGGCACTGGTATAGCAAGTAAAACAACTACTGCAGCTGTTAAACCCAGAAACGGAACAAACATTGTTGCAAAAAGTTTGAAGTCTATTGGAGCCTTAATGGAGAAGAGACTAACTCCAAGATCACTTCACATGTCTATCAATCTCCCTTCTGGTGCCGGTGAGACAAGGAAAATATCATCAGTGATTGAACATAACAGAAACAAAAAAATTCAGTCTGATTTGCCTAAAGTTCATCCCTTGGCAGCACAGACATCGACCCAGGCATCACATGGTTTATTAAATCAAGCTCCAGCAAATCTTCCTTCTCAGGGCAGAAGGACTGAAAGGCTAGTTAACAAGTCTGTGTCTGGAGATGTTACAGTAAATCCAAAACTTTCCCCCCTTTCTGTCGAATCCCTAAAATCTTCAAGCACCACCCAAAGCAATACCCGGTCCCCTACCAAATCATCACCTTTTAGATTCAGAAGTGAAGAAAGAGCAATAAAACGCAAAGAGTTCTTGCAGAAGGTCGCTGAAACTAAACCCAAGGAAGAAGAGAAAGTTCAACTAAGGATATCAAAGGGTAAAACAGAGCATACCCACAAGAAGCTACCGCAGAGCAGTGGCTCTAAATCCAAACCAATTGATGATGGGCCCAGCGGAGCACAATCACCAAGCAATCAGATTAGAAAGATCTCGTTTACAATGCCCCGGTCGCCAAGACAAGTGAGGCAAGCAAATTCTAGTTCTAGTACAACAAAAAACATAGGAAATTCATGGAAGCCTCCAATCAGCACCAATAGTTCCAAACGTATTACAGAAAAAAATAGCCGAACAAGGCAATCAGGAACTTCATTATCAAAGGCCACATGGGAAAATGCTTCTCCAAATATTCAGCATTGA 2130 0.4169 MAESSTCFVQSFSTHADTSSCVTNEGNPLRALGESISFGRFMSESLDWDRWSAFSQNRYVEEAEKYSKPGSVAAKKAYFEAHYKRKAEEKAAALVEETNIQANGSFDSENWEGNCIGSSAKIKSEADNIETTNEEIKKDTVDYQVVDCDDTTQFNCDDVGQSDLEIKSEADNMEITKEEINEDIVDCHAVHCDDIIQCKCDAGENDLDIVEVEGAEDVLQPCNDMSLNAESCMFVDNSNQLDHDEVHKNITIAIEEKAPDPGIPSQEVLALPVKGGEVNSSPKLSAKTRPEKPPLTCDQRKASAAVSPRIGIINGSKRDQRKASAAVSPRIGIINGSKRENSVGDAVVKKRLTARSLHTSINLPSGTAETRKTADSPLRSRNGTNRFSASKNSVGSLVEKKRLTASSLHMSIDVPSGTGIASKTTTAAVKPRNGTNIVAKSLKSIGALMEKRLTPRSLHMSINLPSGAGETRKISSVIEHNRNKKIQSDLPKVHPLAAQTSTQASHGLLNQAPANLPSQGRRTERLVNKSVSGDVTVNPKLSPLSVESLKSSSTTQSNTRSPTKSSPFRFRSEERAIKRKEFLQKVAETKPKEEEKVQLRISKGKTEHTHKKLPQSSGSKSKPIDDGPSGAQSPSNQIRKISFTMPRSPRQVRQANSSSSTTKNIGNSWKPPISTNSSKRITEKNSRTRQSGTSLSKATWENASPNIQH* 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2842 709 MobiDBLite consensus disorder prediction 528 572 - -
Mtr3g2842 709 MobiDBLite consensus disorder prediction 616 709 - -
Mtr3g2842 709 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY 440 709 - -
Mtr3g2842 709 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY 1 374 - -
Mtr3g2842 709 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY 373 431 - -
Mtr3g2842 709 MobiDBLite consensus disorder prediction 276 301 - -
Mtr3g2842 709 MobiDBLite consensus disorder prediction 528 566 - -
Mtr3g2842 709 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY-RELATED 373 431 IPR044216 -
Mtr3g2842 709 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY-RELATED 1 374 IPR044216 -
Mtr3g2842 709 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY-RELATED 440 709 IPR044216 -
Mtr3g2842 709 MobiDBLite consensus disorder prediction 584 709 - -
Mtr3g2842 709 MobiDBLite consensus disorder prediction 584 614 - -
Mtr3g2842 709 Pfam Targeting protein for Xklp2 (TPX2) domain 568 625 IPR027329 -
Mtr3g2842 709 MobiDBLite consensus disorder prediction 362 396 - -
Mtr3g2842 709 Coils Coil 119 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2842 Mtr-Chr3 42393253 42397896 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2842 - - mtr:MTR_3g086090 1373.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2842 3 42393253 42397896 Mtr3g2842 3 42393253 42397896 ECH