Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2840 ATGGCACACTCTTTATCCTCAAATCTTGGTCTCAACCTTTCCATGATTTCCAAGAGTTTATCAAGACAAACTCATTTCTTTCGAGTCAGAGCCATGACCGGTGAAGCAAGAGAAAAACTTGACCATGTTTCAAGATCAAACAACATTAAACACCATCAGTCCCAACCTAAGAAGAGAGTTTTTCCTGCTGCACCGATAGGGTTATGGGATCGATTTCCTACGACAAGGACAGTGCAAGAGATGATGGAAACAATGGAAAGCATGATGGAAGACCCATTTGCAATGAGCACAATTGAGTGGCCTTCATCGCCGCTGCCGATTGAAGGAGTAGGCGGGTATAGAAGGAGGGGAAGAACACCATGGGAGATTAAAGAAGGAGAAAGTGAATACAAGATGAGGTTTGATATGCCTGGTATGAACAAAGAGGATGTTAAGGTTTGGGTGGAAGAAAAGATGCTGGTTGTGAAAGCTGAGAAAGCACCTAAGAAGAAGAATGATGAAGATGAAGAATGGTCTAAGAGCTATGGTAGGTATAGTAGCAGAATTGCTTTGCCAGAGAATGTGCAGTTTGAGAATATTAAGGCTGAGGTTAAGGATGGTGTTCTTTACATAACCATTCCTAAGGCTACTACTTATTCCAAAGTCCTTGATATTAGTGTTCAATGA 666 0.4159 MAHSLSSNLGLNLSMISKSLSRQTHFFRVRAMTGEAREKLDHVSRSNNIKHHQSQPKKRVFPAAPIGLWDRFPTTRTVQEMMETMESMMEDPFAMSTIEWPSSPLPIEGVGGYRRRGRTPWEIKEGESEYKMRFDMPGMNKEDVKVWVEEKMLVVKAEKAPKKKNDEDEEWSKSYGRYSSRIALPENVQFENIKAEVKDGVLYITIPKATTYSKVLDISVQ* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2840 221 CDD ACD_sHsps-like 122 208 - -
Mtr3g2840 221 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 24 221 IPR044587 GO:0009408
Mtr3g2840 221 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 112 221 IPR002068 -
Mtr3g2840 221 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 24 221 - -
Mtr3g2840 221 Gene3D - 69 220 IPR008978 -
Mtr3g2840 221 Pfam Hsp20/alpha crystallin family 122 221 IPR002068 -
Mtr3g2840 221 SUPERFAMILY HSP20-like chaperones 108 211 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2840 Mtr-Chr3 42382667 42383779 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2840 K13993 - gmx:100811966 313.923