Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2837 ATGTTTAAAAAGGTGTTTGGTAAAATTCCTAAAAAGTCCTCAAAAGGTTCTGAGAATCGTGAACAAGGTGGAAATTCAAGAAGCCATGGTGTTGCAACCTCAAAAAACAGTGATGTTGTTACACAACCTGGGAGTAGCAAAACTGGTAATTCTTCTAATTCTTCTTTGAATGCAGGACAAGGACAGTTACATAGTCATGGTAACAAATCTTCATTACCTATGAATGAGAATTCCAATGGTAATTTTAATTCTTATGAAGCTTTACCAGCATTTAGGGATGTTCCGAATTCCGAAAAACCGAGCTTGTTTATAAAAAAGCTTAAGATGTGTAGTGTTGTTTTTGACTTCACTGACCCTACTAAGCATCTTAAGGAAAAGGAGATTAAGAGACAAGCTTTGGTTGAGCTTGTTGATTACGTGTCTTCTGTTAATGCTAAGTTTACTGAGAATGTAATGCAAGAGGTTGTTAAGATGGTGTCTGTAAATATATTCAGAACACTAAGTCCTCAACCGCGTGAGAATAAGCTCGTTGATGGCGTTGAATTGGAGGAGGAGGAGCCTTCGATGGATCCTTCTTGGCCTCATTTGCAAATTGTTTATGAGCTTTTTCTTAGATTTGTGGCATCGCCTGAGCTGGATGCGAAGTTGGCTAAGAGATTCATTGATCAATCGTTTATTTTGAGGCTGCTTGATTTGTTTGACTCCGAAGATCCTAGAGAAAGGGAGTATTTGAAAATGTCTTTACATCGGATCTATGGCAAGTTAATGGCGCATCGACCTTTCATCAGAAAATCAATCAATAACATCTTTTTGAACTTTGTTTTTGAGACTGAGAAGCATAATGGAATTGCTGAGTTTTTGGAAATTCTGGGGAGTATCATTAATGGTTTTGCATTGCCATTGAAAGAAGAGCATAAATTGTTTCTGGTTCGAATATTGATTCCGTTGCACAAACCAAAGTGCTTAGCAATGTATCATCAGCAGTTATCTTATTGCATTACTCAGTTTGTGGAGAAAGACTGCAAGCTTGCTGATACAATAATAAGGGGGTTATTGAAGTACTGGCCGATAACAAATAGTTCAAAGGAAGTTATGTTCCTAGGTGAGTTGGAAGAAGTCTTGGAAGCAACTCAACCTCCAGAATTCCAGCGATGTATGGTGCTATTGTTTCGCCGTGTTTCTCATTGTTTGAATAGCCCCCATTTTCAGGTGGCGGAAAGAGCTTTGTTCTTGTGGAATAACGATCACATCGTGAACTTAATCAAACAAAACTGCAAAGTGATACTTCCTATCATCTTTCCCGCATTGGAGAGAAATACAAAAACTCATTGGAATCAAGCTGTCCATAGTTTGACTTTAAATGTTCAGAAGATTTTTCACGATCTCGATCTCGATCTGTACAAAGAATGTTTACAAAAGTTTGAGCAAGACGAATCAAAGGAAGGTGAAGTGACAGCAGGGCGCGAAGCCACATGGAAACGCTTGGAGGAGGTTGCCGCAAAGAAAGCTGCAAGTAACGAAGCTGTGCTTATTAGTAAAGCACTACCTCGCAAATCTGCAGGTTAG 1566 0.3889 MFKKVFGKIPKKSSKGSENREQGGNSRSHGVATSKNSDVVTQPGSSKTGNSSNSSLNAGQGQLHSHGNKSSLPMNENSNGNFNSYEALPAFRDVPNSEKPSLFIKKLKMCSVVFDFTDPTKHLKEKEIKRQALVELVDYVSSVNAKFTENVMQEVVKMVSVNIFRTLSPQPRENKLVDGVELEEEEPSMDPSWPHLQIVYELFLRFVASPELDAKLAKRFIDQSFILRLLDLFDSEDPREREYLKMSLHRIYGKLMAHRPFIRKSINNIFLNFVFETEKHNGIAEFLEILGSIINGFALPLKEEHKLFLVRILIPLHKPKCLAMYHQQLSYCITQFVEKDCKLADTIIRGLLKYWPITNSSKEVMFLGELEEVLEATQPPEFQRCMVLLFRRVSHCLNSPHFQVAERALFLWNNDHIVNLIKQNCKVILPIIFPALERNTKTHWNQAVHSLTLNVQKIFHDLDLDLYKECLQKFEQDESKEGEVTAGREATWKRLEEVAAKKAASNEAVLISKALPRKSAG* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2837 521 MobiDBLite consensus disorder prediction 19 80 - -
Mtr3g2837 521 Gene3D - 95 498 IPR011989 -
Mtr3g2837 521 MobiDBLite consensus disorder prediction 1 80 - -
Mtr3g2837 521 SUPERFAMILY ARM repeat 100 481 IPR016024 -
Mtr3g2837 521 PIRSF PP2A_B56 2 520 IPR002554 GO:0000159|GO:0007165|GO:0019888
Mtr3g2837 521 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 520 IPR002554 GO:0000159|GO:0007165|GO:0019888
Mtr3g2837 521 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 88 499 IPR002554 GO:0000159|GO:0007165|GO:0019888
Mtr3g2837 521 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2837 Mtr-Chr3 42359149 42364424 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2837 K11584 - gmx:100811438 851.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2837 3 42359149 42364424 Mtr3g2837 3 42359149 42364424 ECH