Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2836 ATGACGGAAAACGAAGGAAAGCGTGAGAAAATGGAAAAACTCAAGAAAGGTAGAGGCATGATCGCCTTCACCGGAACCGCCGCGGTTCTTGCAATCGCCGTTAACCTCGTTATTGCCGCCGTCAAACACCAGAAAGAGAAAAATGCAAAGAAGAAAGATCTTGCTGGTTCTAAGGTTCGTGTTAACCTATCTCCATCTGAGATTGTTAAATTAGCTAACCAAATCATTGCTAAGTCAAATGAGGTTCATAATTTGGTTGCATCCGTGCCACTCGATAAGGTTACATATGCAAATGTTATATCACCTCTAGCAGAACTTCAAGCGCAACAATTTCCATTGATTCAATCTTGCCTGTTACCAAAGCTGGTATCTACACGGGAGGATGAGCGCAAAGCAAGTGCAGAAGCAGAGCGAAGAATAGATGCTCATCTTAACATTTGCAGCAAACGTGAAGACATATATCTTGTCGTTAAAGCATTTGCAGTGAGGGGGGACTGGATGAATGCTGAAATCAAAAGCTTTGTTCAAATTCTGGTGAGAGATTTTGAGCGAAATGGATTGAACCTTAGTGCAAGCAAAAGAGAAGAGTTGCTGCGTATAAAAGCTCAGATTGACGAGTTAAGCATTATATATATCCAAAATCTTAACGATGCTAGCGCATTTCTTCCCTTCAATGAGTCAGAGTTAGCTGGATTACCTCCAGAGTTTCTCAAGGGTTTAGATAAATCTGAAAATGGACAATTGAAGATCTCCTTGAGAAGCCATCATGTCACAGCTGTACTCGAATTTTGCAAGGTTGGAACTACGAGAAGGATGGTATCACGGGCATATGGGAATCGTTGCGGAGAAGCCAATCTTTCTATTTTAGAAAGTCTGGTGCAACAGCGTCATAAATATGCTCGCTTACTTGGTTATTCGTGCTATGCTGAGTATGCTGTTGATGTTAGAATGGCAAAAACACCGACAAAGGTGTTCGAGTTTCTGAATGACATATCCGTACGTGTTACTGACATGGCTACAAAAGAACTTGATGTCTTGAAAGATTTGAAGAAGAAAGAGGAAGGGGAGTTTCCATTTGGAATCGAAGACCTACTGTATTATGTAAAACGGGTCGAAGAACAGAGTTATGATTTGGACTTCGGCGAGATCAAGCAATACTTACCAATTGGTTTAGTTCTATCTGGAATCTTCAAAATTGTCCAAGATCTTTTTGGTTTAAGGTTTGAGGAAATTGCAGGAGCTGAAGTTTGGCATTGTGATGTTCGTGTATTTGCAGTATTTGACTTAAGTTCAAGTGAACTTTTGGGTTATTGCTACCTTGATTTATTCTCAAGGGAAGGCAAATATGGTCACAGTTGTGTTGTGCCTCTCCAGAACAGTGCATTAACAATCAGTGGGGCCCGACAGATACCAGTTGCATTACTAATATCTCAGTGTCAAAAGGATTCTGAATTTAGTCCTGGATTATTGCGTTTTTCTGAAGTGGTCAGTCTTTTCCGCGAGTTTGGCCATGTGGTTCAACACATTTGCAACCGTGCTTCATTTGCTAGATTTTCTGGATTTCGTGTTGATCCTGACTTTGTGGAAATACCTGCTCAACTGCTACAAAACTGCTGTTATGAAAGCTTTTCTCTGAAGTTGATTTCTGGATTTCATCAGGATATCACAAAGCCCTTAAAGGATGACCTATGCAAATCAATTAAAAGATGGAGAAATTCTTCTTCTGCACTTAAATTAAAACAAGAGATTCTATACTGCATTTTTGATCAAATCATTCATTCTGCGGATAACATAGATATTCGTGAGTTATTCAAGCATCTTCATTCCAAGGTGATGTTAGGGTTGCCGGTATTAGAAGGAACCAATCCTGCTTCATGTTTTCCTTTTAGTGTTGTTGGTTATGAGGCAGCTTGCTACAGTCGTATATGGAGTGAGGTTTTTGCCGCTGATATATGTGCTTCTATGTTTTGCAATGGTGTTCCAAACCAGCTTCGTGGCATGCAATTTAGGAACAAGGTATTGGCCCCAGGAGGAGCGAAGGATTCTATAGAAGTGATATCAGACTTTCTAGGAAGAGAACCATCGATTCTATCTTATATTGAAAACAAAGCCAAGTATACTTTGTAA 2127 0.401 MTENEGKREKMEKLKKGRGMIAFTGTAAVLAIAVNLVIAAVKHQKEKNAKKKDLAGSKVRVNLSPSEIVKLANQIIAKSNEVHNLVASVPLDKVTYANVISPLAELQAQQFPLIQSCLLPKLVSTREDERKASAEAERRIDAHLNICSKREDIYLVVKAFAVRGDWMNAEIKSFVQILVRDFERNGLNLSASKREELLRIKAQIDELSIIYIQNLNDASAFLPFNESELAGLPPEFLKGLDKSENGQLKISLRSHHVTAVLEFCKVGTTRRMVSRAYGNRCGEANLSILESLVQQRHKYARLLGYSCYAEYAVDVRMAKTPTKVFEFLNDISVRVTDMATKELDVLKDLKKKEEGEFPFGIEDLLYYVKRVEEQSYDLDFGEIKQYLPIGLVLSGIFKIVQDLFGLRFEEIAGAEVWHCDVRVFAVFDLSSSELLGYCYLDLFSREGKYGHSCVVPLQNSALTISGARQIPVALLISQCQKDSEFSPGLLRFSEVVSLFREFGHVVQHICNRASFARFSGFRVDPDFVEIPAQLLQNCCYESFSLKLISGFHQDITKPLKDDLCKSIKRWRNSSSALKLKQEILYCIFDQIIHSADNIDIRELFKHLHSKVMLGLPVLEGTNPASCFPFSVVGYEAACYSRIWSEVFAADICASMFCNGVPNQLRGMQFRNKVLAPGGAKDSIEVISDFLGREPSILSYIENKAKYTL* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2836 708 Gene3D Neurolysin, domain 3 194 697 IPR024077 -
Mtr3g2836 708 PANTHER PROTEASE M3 THIMET OLIGOPEPTIDASE-RELATED 47 705 IPR045090 GO:0004222|GO:0006508
Mtr3g2836 708 CDD M3A_TOP 70 695 - -
Mtr3g2836 708 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 61 700 - -
Mtr3g2836 708 Gene3D Endopeptidase. Chain P; domain 1 37 184 IPR024080 -
Mtr3g2836 708 PANTHER SACCHAROLYSIN 47 705 - -
Mtr3g2836 708 Pfam Peptidase family M3 264 698 IPR001567 GO:0004222|GO:0006508
Mtr3g2836 708 Gene3D Collagenase (Catalytic Domain) 388 538 IPR024079 GO:0008237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2836 Mtr-Chr3 42346655 42356324 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2836 K01392 - gmx:100793518 1135.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2836 3 42346655 42356324 Mtr3g2836 3 42346655 42356324 ECH