Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2827 ATGTGGACAGTTCTACGAGCTCGAGCTGGTTGTTCCTCGCGTTCTCTTCTTCAACCATGGAAGCTAGGGTTTCCCTCTCTATCCACCACCGCCTTTGACGGTGGCGTCCTCGATCTGCAAGAAATCCAAAAGATTCTTACGGACGTTCAAGCTGACGACGTCAAGATAATTCCAGCTCCTAAGCACAACGACTGGACTGATTTCATGGTACTTGCTACTGGTAGATCCTCTTGGCACGTCAAGAATATCGCTCAAGCCCTTATTTACCAGGCTAAGCAGAAGCAGATAGGAGTTGAGCGAATGATGCTGCCTAGTGTGCAAGGGCAAGAGGATGGAAAGTGGATCGTCATTGACTCCGGTAAAGTAATAGTTCATGCACTTGATGAAAATGCTAGAGCTTACTACAATTTGGAGGGTCTTTGGACCCGTGGGACATTGCCAAATGAACCTATTGAGGATTTACATAAAGCTTTGGTGAAGGTCAGGCGGAAAAACAATTCCAAGAAACCTGCCCAAAAGAAAGCCTAA 528 0.4659 MWTVLRARAGCSSRSLLQPWKLGFPSLSTTAFDGGVLDLQEIQKILTDVQADDVKIIPAPKHNDWTDFMVLATGRSSWHVKNIAQALIYQAKQKQIGVERMMLPSVQGQEDGKWIVIDSGKVIVHALDENARAYYNLEGLWTRGTLPNEPIEDLHKALVKVRRKNNSKKPAQKKA* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2827 175 PANTHER MITOCHONDRIAL ASSEMBLY OF RIBOSOMAL LARGE SUBUNIT PROTEIN 1 31 166 - -
Mtr3g2827 175 Gene3D Beta Polymerase, domain 2 38 152 IPR043519 -
Mtr3g2827 175 Hamap Ribosomal silencing factor RsfS [rsfS]. 31 142 IPR004394 -
Mtr3g2827 175 SUPERFAMILY Nucleotidyltransferase 40 146 IPR043519 -
Mtr3g2827 175 TIGRFAM rsfS_iojap_ybeB: ribosome silencing factor 39 141 IPR004394 -
Mtr3g2827 175 PANTHER IOJAP SUPERFAMILY ORTHOLOG 31 166 IPR004394 -
Mtr3g2827 175 Pfam Ribosomal silencing factor during starvation 41 141 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2827 - - gmx:100500659 257.684