Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2818 ATGCTACAATCAGAAAGATCACTACGTAGCAACCTTCCAATAATTCGAATACCAGGAGATGGTAGATGTATGTTTAGATCTGTGGTCTACGGTGCCTGCCTCAGAAAAGGGGACCCACCTCCAAGTCTCACCAGGCAAAAAGAACTTGCAGATGAGCTCAGAGCCAAAGTTGTGGATGAGTTCATCAAGAGGAGAGTAGACACCGAATGGTTTCTTGAAGGTGACTTTAACACTTATACGGTACAAATGAGAAAGGCTCAAGTATGGGGAGGAGAACCTGAACTTCTAATGTCGTCGCATGTTTTACAGATGCCTATAACAGTGGTCATGCAGGATACGAATTCCAATAACCTTAAAATTATAGCTGAATACGGCCAGGAGTATGGCAAGGAGAACCCTATTAGAGTCATCTATGATGGTTTTGGTCACTATGATGTACTGAAGTGTTCAACATGA 456 0.4276 MLQSERSLRSNLPIIRIPGDGRCMFRSVVYGACLRKGDPPPSLTRQKELADELRAKVVDEFIKRRVDTEWFLEGDFNTYTVQMRKAQVWGGEPELLMSSHVLQMPITVVMQDTNSNNLKIIAEYGQEYGKENPIRVIYDGFGHYDVLKCST* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2818 151 SUPERFAMILY Cysteine proteinases 10 147 IPR038765 -
Mtr3g2818 151 PANTHER OS01G0900900 PROTEIN 10 150 - -
Mtr3g2818 151 ProSiteProfiles OTU domain profile. 12 150 IPR003323 -
Mtr3g2818 151 Gene3D - 2 151 - -
Mtr3g2818 151 PANTHER OTU DOMAIN CONTAINING PROTEIN 10 150 - -
Mtr3g2818 151 Pfam OTU-like cysteine protease 18 144 IPR003323 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2818 Mtr-Chr3 42159256 42161286 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2818 K18342 - gmx:100792132 263.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2818 3 42159256 42161286 Mtr3g2818 3 42159256 42161286 ECH