Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2815 ATGTTCGGCGGTCAATCTTCATCTTCCCTCTTCGGAACTCCATCTTCAGCATTCGGCACTCCAACCTTCGGTACTCCATCTTCCACACCAGCTTTCAGCACCCCAGGTTTCGGTACCCCTTCTTCAACTCCTGCTTTTGGTGCTTCTTCTACACCCGCTTTCGGTGGTGGTTCTTCCCTCTTCTCAACACCGTTCTCTGCTCAACAACAACCCCAACAACAGCAGCAGCAACAGCAGAATTCACTCTTTCAACTATCACCTTCTACTGGTTTTGGGTTTCAGAATTCTACGCCAGCGCCGCAACCTTCGCCGTTTCCAAATTCTCAATTGACTACTCAAATGGCTAATGTTGCTCCAGTTCCATTCTCACTGGCGGATCGTGATATTCAAGCGATTCTTGATTCTTATAAGGAAGATGCTGGAAACCCCAAATACGCTTTTAAGCATTTGTTATTCAGTGTAACAGACCCACAATTTAGGGTGAAGCCTGCTGGTGTTTCAGATATCATGTGGGCGGAAGCTATGGGGAAGCTTGAGGGTATGGAAAGTGCTGATAGAGAACGTCTTTGGCCACAACAAGTTCAAGGTTTTAAGGATCTTTCCCAACGCCTTAAGCTCCAAGATGAAGTCATTGTCTCTGATGCAGAGAGATTAAGTGTAACCCAAAGCAATGTTAAAATGCTCCAAAGACATTTTCAAGCAGATACTCTTCCTTGGATTCAAAGACTGAAACAGAAAGAACAGATTCTTCAGCAACGTATTTTAAGAGTGATGAGAATAGTGGAGGCGTTGGAGGGAAAAGGCTGCCGTATTCCATTAACAAAAGGGGAAGCTGAACTCGCTGAGAAATTAGCCACAATAACTAGACAGCTGAAAGGATCTGGAGCGGAATTATCTAGAAGGGTACAAAATCTACTCGGCGTATCTCGTGTCAAGGCTAATAGCAATGGATTTTGTAACTCAGCTCATCTTCTGGGCTCAACCAAAATTCATGATCAAAGTCTGGCTGACCTGCAGGAGGTTTTACAGCAGCAGATGGATGCCATAGCAAGACTTGGCAGTGTTCTAAAGCGAGATGCACGGGATATGGAGATTATGATGGCCGAGGACACAGACTTCAGAAAATGGACATTTAATGTAAACTTGCTTAAGAAATCTGTAGCCTTCTTGCTTCATATTTTCCTTTGA 1188 0.4444 MFGGQSSSSLFGTPSSAFGTPTFGTPSSTPAFSTPGFGTPSSTPAFGASSTPAFGGGSSLFSTPFSAQQQPQQQQQQQQNSLFQLSPSTGFGFQNSTPAPQPSPFPNSQLTTQMANVAPVPFSLADRDIQAILDSYKEDAGNPKYAFKHLLFSVTDPQFRVKPAGVSDIMWAEAMGKLEGMESADRERLWPQQVQGFKDLSQRLKLQDEVIVSDAERLSVTQSNVKMLQRHFQADTLPWIQRLKQKEQILQQRILRVMRIVEALEGKGCRIPLTKGEAELAEKLATITRQLKGSGAELSRRVQNLLGVSRVKANSNGFCNSAHLLGSTKIHDQSLADLQEVLQQQMDAIARLGSVLKRDARDMEIMMAEDTDFRKWTFNVNLLKKSVAFLLHIFL* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2815 395 Pfam Nucleoporin complex subunit 54 162 306 IPR025712 -
Mtr3g2815 395 MobiDBLite consensus disorder prediction 1 110 - -
Mtr3g2815 395 PANTHER NUCLEOPORIN P54 4 372 - -
Mtr3g2815 395 PANTHER NUCLEOPORIN P54 4 372 IPR024864 GO:0005643
Mtr3g2815 395 MobiDBLite consensus disorder prediction 1 98 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2815 K14308 - gmx:100797030 560.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2815 3 42131116 42136052 Mtr3g2815 3 42131116 42136052 ECH