Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2802 ATGGCCACCATTGAGGTTGAATACACGAACAAAGAACTAAAGCACCTAGGGTTTTTGAAGATCGCTGCTATTCATACTTATGTGTTTATCTCATATCTGTATGAATCCGCTAAGAAGAACGCGGGACCTTTGAGATCCGTTGTTGAAACAGTGGAGGGAGCCGTAACCACTGTTGTTGGTCCTGTCTACAACAAATTCAAGGACGTCCCTGATGATGTCCTTGTTTTTGTTGACAACAAGGTGGATGAAGCAACCGACAAGTTCAGTGAGCATGCTACTCATATTGCTAAGCAGCTTACAGACAAAACAAAATTCTTGATTCAGAAAGTAACACATGAGGCAGGGAAAGTTGGAAGACCAAGAGCAGCTGTAGATTATGTTGCTACAGAGACCAAGAATTTGCTACTAATTAATTCAGTGAAGCTTTGGACTGGACTCAACAAATTTCCACCATTCCATGCAGCAGCAGAGATGACAATTCCCACTGCCGCTCACTGGTCTAAGAAATACAACCATGCAATCAAGGACATGGCTGGAAAGGGTTATAGTTTTGTTGGTGTTTTTTGTTACAAGTCATGGACTCGGAGCTGCCCTCCTATCACTCTTGTCCTGGACTTGGATGAAACTTTGGTGCACTCTTCCCTGAAACCTTCTGAGGATGTAGACTTTACTTTCACTGTGAATTTTAAATCTGAGGAGTACATTGTCTATGTACGCTGCCGTCCTCACCTAAAAGAATTCCTTGAGAGAGTTTCTGGTCTTTTTGAGATTATTATATTTACAGCTAGTCAAAGTATTTATGCTGAGCAACTCCTAAATTTGCTTGATCCAAAGCGGAAGATATTTCGCCATCGTGTATTCCGTGAATCTTGTGTTAAAGTGGAGGGGAATTACCTCAAAGATTTAACAGTGCTTGGTTGTGATTTAGCACATGTTATGATAATTGACAACTCCCGACGGGCATTTGGATTCCAAGTGGACAATGGAATACCAATTAAGAGTTGGTTTGGCGATCCTTCGGATAAAGAATTGCTTTTATTACTTCCTTTCTTGGAGAGTTTGGTAGGAGTTGATGATGTCCGGCCCAAAATTGCTCAAAGGTTCAAGCTCCGGGATAAAATTGCTACTGCTGTGCATCCTTTGAATACAAATGGAAGGGATTTCTTGTCTGAATAA 1176 0.4133 MATIEVEYTNKELKHLGFLKIAAIHTYVFISYLYESAKKNAGPLRSVVETVEGAVTTVVGPVYNKFKDVPDDVLVFVDNKVDEATDKFSEHATHIAKQLTDKTKFLIQKVTHEAGKVGRPRAAVDYVATETKNLLLINSVKLWTGLNKFPPFHAAAEMTIPTAAHWSKKYNHAIKDMAGKGYSFVGVFCYKSWTRSCPPITLVLDLDETLVHSSLKPSEDVDFTFTVNFKSEEYIVYVRCRPHLKEFLERVSGLFEIIIFTASQSIYAEQLLNLLDPKRKIFRHRVFRESCVKVEGNYLKDLTVLGCDLAHVMIIDNSRRAFGFQVDNGIPIKSWFGDPSDKELLLLLPFLESLVGVDDVRPKIAQRFKLRDKIATAVHPLNTNGRDFLSE* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2802 391 SMART forpap2 198 342 IPR004274 -
Mtr3g2802 391 TIGRFAM HIF-SF_euk: dullard-like phosphatase domain 201 363 IPR011948 GO:0016791
Mtr3g2802 391 PANTHER RUBBER ELONGATION FACTOR-RELATED 2 188 - -
Mtr3g2802 391 Pfam Rubber elongation factor protein (REF) 9 185 IPR008802 -
Mtr3g2802 391 Gene3D - 188 368 IPR023214 -
Mtr3g2802 391 ProSiteProfiles FCP1 homology domain profile. 195 354 IPR004274 -
Mtr3g2802 391 Pfam NLI interacting factor-like phosphatase 201 361 IPR004274 -
Mtr3g2802 391 PANTHER REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940 2 188 IPR008802 -
Mtr3g2802 391 SUPERFAMILY HAD-like 198 365 IPR036412 -
Mtr3g2802 391 CDD HAD_FCP1-like 199 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2802 Mtr-Chr3 42035496 42039187 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2802 K17616 - gmx:100798665 328.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2802 3 42035496 42039187 Mtr3g2802 3 42035496 42039187 ECH