Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2793 ATGAAGAACCAACAACATCAAATGTTCATGTGTCTTTGTGTTTTGGCTCTCATCATAGGTGGCTGTAATGGAGCTGAAGATTTGGCTTCAAAGTGTGGATCAGTGGTTCAAAAAGTGATTCCATGTCTGGACTTTGCAACTGGGAAAGCACCTACACCAAAGAAGGAATGCTGTGATGCTGCCAACAGTATCAAGGCAACGGATCCAGAGTGTTTGTGCTATATCATTCAACAGACTCATAAGGGTAGCCCTGAAAGTAAGAGCATGGGTATTCAGGAAGATAAGCTTCTTCAACTCCCTACTGTTTGTCACGTCAACGGCGCCAACATTTCCGACTGTCCCAAGCTTCTTGGTCTATCTGCAAACTCCCCCGACGCTGCAATCTTTAAAAATGCTTCAAAGGCAAATCCTACTCCTTCATCAGCTGCTGCAACCACCGCAACTCCTACAACTCCCACCCCGGCAAGCACAGGTGGTTCATCCAACCTTAGACCTGTCATGATCAACAACGTGATGACGGTGATTTTGGCCATTGTTCTTGCTGCAGTACCTGCTGGATTTATCAGCATTTATACATGA 579 0.456 MKNQQHQMFMCLCVLALIIGGCNGAEDLASKCGSVVQKVIPCLDFATGKAPTPKKECCDAANSIKATDPECLCYIIQQTHKGSPESKSMGIQEDKLLQLPTVCHVNGANISDCPKLLGLSANSPDAAIFKNASKANPTPSSAAATTATPTTPTPASTGGSSNLRPVMINNVMTVILAIVLAAVPAGFISIYT* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2793 192 Gene3D - 29 109 IPR036312 -
Mtr3g2793 192 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 10 183 IPR043325 -
Mtr3g2793 192 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Mtr3g2793 192 Pfam Probable lipid transfer 26 113 IPR016140 -
Mtr3g2793 192 CDD AAI_LTSS 41 105 - -
Mtr3g2793 192 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 30 113 IPR036312 -
Mtr3g2793 192 SMART aai_6 32 113 IPR016140 -
Mtr3g2793 192 PRINTS Plant phospholipid transfer protein signature 31 47 IPR000528 GO:0006869|GO:0008289
Mtr3g2793 192 PRINTS Plant phospholipid transfer protein signature 52 66 IPR000528 GO:0006869|GO:0008289
Mtr3g2793 192 PRINTS Plant phospholipid transfer protein signature 90 107 IPR000528 GO:0006869|GO:0008289
Mtr3g2793 192 PANTHER NON-SPECIFIC LIPID TRANSFER PROTEIN GPI-ANCHORED 1 10 183 - -
Mtr3g2793 192 MobiDBLite consensus disorder prediction 131 162 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2793 31 183 Acyl Lipid Metabolism Gene Families AT1G27950 48.366 4.23e-42 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2793 - - adu:107482371 203.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2793 3 41959868 41964175 Mtr3g2793 3 41959868 41964175 ECH