Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2792 ATGTCTCAGCTTGATAACAGGAATTCTTCTGCTTCCAAGCGTGCCAGGACTGATGGTAGCCGCAGGGAAGATGATTGGACATGTCCTAGCTGCGGTAATGTCAATTTCTCTTTCAGGACAACCTGCAATATGCGTAACTGCACCCAACCAAGGCCTGCTGATCATAATTCTAAATCTGCTGTGAAGCCTCTTCAAGCTCCACAGGCCTATTCATCCGCAGCTCCTTATTTAGGCTCCAACGCCCCCCCTTCAATTTATATTGGTGCCCCACCTTATGGGTCTTTATTCAATGGATCACCAGTTCCTCCCTATGAGGTTCCATTTACCGGAGGATCAGCTTATCAGTACAGTTATGGAAGCCGTGTTCCTGCTGGCAGTCCGTATAGACCATTACATCTAGCAGGACCAGCACCATACACCAGTGGAGCCGTGGTGGGACACGGTGGGATATATGCCATGCCCCAGCTATTGGATCGCTATGGCCTCGGTGTCCCTATTGGACCTGGAGCAATGGGCACTAGGCCAGGATTTTTTCGTGATGACAAGTCTCAGAAAAAGGGACCAGATGCAACTCGTGACAATGATTGGGCTTGTCCAAAATGTGGCAACGTCAATTTCTCATTTAGAACTGTTTGTAACATGAGAAAGTGCAACACACCCAAACCCGGATCCCAGGCCTCAAAGTCTGATAAGAACACTAAGCAAAAGATGCCCGAGGGAAGCTGGAAATGTGAAAAATGTAATAACATAAATTACCCATTCCGAACCAAGTGCAACAGACAGAATTGTGGTGCTGATAAGCCAGCTGAATCGGAAAAATCTCCCTCATCATCTCCAGATCAAAATGAACAGTGA 855 0.4725 MSQLDNRNSSASKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAVKPLQAPQAYSSAAPYLGSNAPPSIYIGAPPYGSLFNGSPVPPYEVPFTGGSAYQYSYGSRVPAGSPYRPLHLAGPAPYTSGAVVGHGGIYAMPQLLDRYGLGVPIGPGAMGTRPGFFRDDKSQKKGPDATRDNDWACPKCGNVNFSFRTVCNMRKCNTPKPGSQASKSDKNTKQKMPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSSSPDQNEQ* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2792 284 Gene3D - 228 270 - -
Mtr3g2792 284 Gene3D - 185 224 - -
Mtr3g2792 284 Gene3D - 13 54 - -
Mtr3g2792 284 SUPERFAMILY Ran binding protein zinc finger-like 186 224 IPR036443 -
Mtr3g2792 284 PANTHER ZINC FINGER PROTEIN 8 275 - -
Mtr3g2792 284 Pfam Zn-finger in Ran binding protein and others 22 44 IPR001876 -
Mtr3g2792 284 Pfam Zn-finger in Ran binding protein and others 193 222 IPR001876 -
Mtr3g2792 284 Pfam Zn-finger in Ran binding protein and others 238 268 IPR001876 -
Mtr3g2792 284 MobiDBLite consensus disorder prediction 178 193 - -
Mtr3g2792 284 MobiDBLite consensus disorder prediction 219 243 - -
Mtr3g2792 284 SUPERFAMILY Ran binding protein zinc finger-like 232 269 IPR036443 -
Mtr3g2792 284 MobiDBLite consensus disorder prediction 263 284 - -
Mtr3g2792 284 PANTHER OS08G0521400 PROTEIN 8 275 - -
Mtr3g2792 284 MobiDBLite consensus disorder prediction 172 194 - -
Mtr3g2792 284 MobiDBLite consensus disorder prediction 11 25 - -
Mtr3g2792 284 SUPERFAMILY Ran binding protein zinc finger-like 16 54 IPR036443 -
Mtr3g2792 284 MobiDBLite consensus disorder prediction 1 27 - -
Mtr3g2792 284 SMART zf_4 194 220 IPR001876 -
Mtr3g2792 284 SMART zf_4 240 266 IPR001876 -
Mtr3g2792 284 SMART zf_4 24 50 IPR001876 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2792 179 271 EF-hand Containing Proteins AT1G55040 32.258 8.99e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2792 - - gmx:100796535 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2792 3 41946371 41952121 Mtr3g2792 3 41946371 41952121 ECH