Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2790 ATGGAAGGGCTGGCCATGCTGAAGCAGCTCATCGGTCAGCTTCAGCAACTTCTCGACTCTCATCATCATTCTTCTTCTTCTTCTTCATCTTCTTCCGTTCTTCAACAACAATCTTCTCATCAAACTATCTTCCTTCAACATCACCCTCCCAGATGGACCTCCTTTGACCTCGAAGATAGCTCTGTAGATGACTGTTGTGGCCTTGTAATGGCAGCTGGAAAGTCTCATAGTTTTAGGATGTCAGAGCCTCTGAAGCCTCCACCCGCTAAGAAGCCTCGAAGAGATCGAAGCAGGGGCAAATCATCAGGAAGATCCAGTACAAGTGAAGTTATGGAACAAGAAATATGGAAAGATTTTCCTGAAGATTTATTTGAGGCTGTAATTGCACGACTTCCCATTGCCGCGTTTTTCCGCTTCCGCTCTGTATGCCGTCAATGGAATTCCTTGCTGGCTTCTCAAAGCTTTTCTAAGCAATGTGCGGAAGTCCCGCAAGAAAATCCATGGTTTTACACCATAACCCATGAAAATGTGAATTCAGGAGCCATGTATGACCCTTCTTTGAAAAAGTGGCATCATCCGTCTATATCACCACTGCCCACAAAGTTGATTGTTTTGCCGGTGGCTTCTGCTGGGGGTTTAGTTTGCTTTCTTGACATTGGCCATCGTAATTTCTATGTATGTAACCCACTGACTCAATCCTTCAAGGAGTTGCCAGCTCGGTCAGTTAAGGTCTGGTCTCGCGTTGCTGTAGGGATGACAGTGAATAGAAATTCAATCGGTTCAGGCTACAAGATCCTATGGGTGGGTTGTGATGGAGAATATGAAGTTTATGACTCGGTGAAAAACTCTTGGAGTCGTCCAGGAAACATGCCTGGAAGTATGAACCTGCCATTGTCCCTTAACTTCAGGTCGCAAACTGTCTCTATTGACAGTACCCTATACTTCATGCGTTCAGATCCAGAAGGGGTTGTTTCCTATGATATGGCAACGGGGGTTTGGAAACAGTACATAATCCCAGCGCCACTACATCTGACTGACCACACTCTAGCTGAGTATGACGGTCAGATCATGCTTGTGGGCTTGCTCACAAAGAATGCAGCCACGTGTGTATGCATATGGGAGCTGCAGAGAATGACACTCTTGTGGAAGGAGGTAGACAGAATGCCAAATATATGGTGCTTGGACTTTTATGGTAAGCACGTCAGAATGACTTGCCTAGGGAACAAAGGCTTGCTCATGTTGTCCCTGAGATCGAAACAAATGAATCGGTTGGTTACTTACAACATAGCAAAGAAAGAATGGCTGAAGGTTCCTGGTTGTGTGGTGCCGAATGGGAAGAAACGGCAGTGGATAGCATGTGGTACTGCATTTCATCCATGCTTGACCGCCGTGGCTTGA 1398 0.4599 MEGLAMLKQLIGQLQQLLDSHHHSSSSSSSSSVLQQQSSHQTIFLQHHPPRWTSFDLEDSSVDDCCGLVMAAGKSHSFRMSEPLKPPPAKKPRRDRSRGKSSGRSSTSEVMEQEIWKDFPEDLFEAVIARLPIAAFFRFRSVCRQWNSLLASQSFSKQCAEVPQENPWFYTITHENVNSGAMYDPSLKKWHHPSISPLPTKLIVLPVASAGGLVCFLDIGHRNFYVCNPLTQSFKELPARSVKVWSRVAVGMTVNRNSIGSGYKILWVGCDGEYEVYDSVKNSWSRPGNMPGSMNLPLSLNFRSQTVSIDSTLYFMRSDPEGVVSYDMATGVWKQYIIPAPLHLTDHTLAEYDGQIMLVGLLTKNAATCVCIWELQRMTLLWKEVDRMPNIWCLDFYGKHVRMTCLGNKGLLMLSLRSKQMNRLVTYNIAKKEWLKVPGCVVPNGKKRQWIACGTAFHPCLTAVA* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2790 465 SUPERFAMILY F-box domain 109 199 IPR036047 GO:0005515
Mtr3g2790 465 Gene3D - 116 155 - -
Mtr3g2790 465 MobiDBLite consensus disorder prediction 21 40 - -
Mtr3g2790 465 SMART fbox_2 119 159 IPR001810 GO:0005515
Mtr3g2790 465 ProSiteProfiles F-box domain profile. 113 158 IPR001810 GO:0005515
Mtr3g2790 465 SUPERFAMILY Galactose oxidase, central domain 180 444 IPR011043 -
Mtr3g2790 465 Pfam F-box domain 116 155 IPR001810 GO:0005515
Mtr3g2790 465 MobiDBLite consensus disorder prediction 77 110 - -
Mtr3g2790 465 PANTHER F-BOX/KELCH-REPEAT PROTEIN 48 464 - -
Mtr3g2790 465 Gene3D - 168 451 IPR015915 GO:0005515
Mtr3g2790 465 PANTHER BNAA07G08860D PROTEIN 48 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2790 Mtr-Chr3 41925001 41929296 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2790 - - gmx:100810179 788.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2790 3 41925001 41929296 Mtr3g2790 3 41925001 41929296 ECH