Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2780 ATGGCTGCCTCTGTTATACTCTCTACTTCTTTCTCTCCAACCCATCATCCATCCTTGTTCTCTTCCTCTTCTTCCATTTCATTATCCAAACCAAAATCCACTTCTCAACGCTTCTCATCTCCAAATTCAAAACCACTATCTTTCTCTCACAGGTTCAACTTCAGCTTCGTTACCCATTCTTCAGTAAAGGAAAAAGACACCACCTTCGTGGGAGAGGATTCCGCAGCTTTTAATTTGACTGAACAGAAAATAACTTCATGGATTTATTTCGCCGCAATTTTGGGAGTTGTTCTCTTCATTCTAAATGTGGTATGGATTGATAACTCAACTGGCTTTGGTAAAGCTTTCGTCGATGCTGTTTCAGGGCTCTCCGATTCTCACGAGGTGGTAATGTTGATCCTAATTCTCGTATTTGCCGTTTTCCACAGTGGCATGGCTAGCCTACGGAATACCGGTGAGAAAATCATTGGTGAAAGAGCTTTTCGGGTTATTTTTGCAGGGATATCACTACCTTTAGCTGTCACCACTATTGTGTATTTTATTAATCACAGATATGATGGAATTCAACTCTGGCAGCTCCAGAGTACTCCGGGGATTCATCAACTTCTGTGGCTTTCCAATTTCATCTCTTTCTTTTTCCTATATCCTTCAACCTTTAATCTTTTAGAAATTGCAGCAGTTGACAAGCCTAAAATACATCTATATGAAACTGGCATCATAAGAATAACCAGGCATCCACAGATGGTTGGTCAGGTAATCTGGTGTCTTGCTCATACAATTTGGATTGGAAATTCTGTGGCTGTTGCAGCTTCAATTGGCTTAATTTCACATCATCTATTTGGTGCTTGGAATGGAGATAGGCGATTAGCTCAAAGACATGGAGAAGATTTTGAGATCGTTAAGCGTCGAACAAGTATTGTCCCTTTTGCAGCAATCCTTGATGGCCGTCAAAGATTACCTGCGGATTTCTACAAGGAGTTTATTAGATTACCATACTTAGTAATTACTGCATTAACACTAGGAGCTTACTTTGCACACCCTCTTATGCAGACTGCTAGTTTCAACCTCCATTGGTAG 1077 0.4058 MAASVILSTSFSPTHHPSLFSSSSSISLSKPKSTSQRFSSPNSKPLSFSHRFNFSFVTHSSVKEKDTTFVGEDSAAFNLTEQKITSWIYFAAILGVVLFILNVVWIDNSTGFGKAFVDAVSGLSDSHEVVMLILILVFAVFHSGMASLRNTGEKIIGERAFRVIFAGISLPLAVTTIVYFINHRYDGIQLWQLQSTPGIHQLLWLSNFISFFFLYPSTFNLLEIAAVDKPKIHLYETGIIRITRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLISHHLFGAWNGDRRLAQRHGEDFEIVKRRTSIVPFAAILDGRQRLPADFYKEFIRLPYLVITALTLGAYFAHPLMQTASFNLHW* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2780 358 MobiDBLite consensus disorder prediction 15 44 - -
Mtr3g2780 358 Gene3D - 124 309 - -
Mtr3g2780 358 Pfam NnrU protein 130 349 IPR009915 -
Mtr3g2780 358 PANTHER 15-CIS-ZETA-CAROTENE ISOMERASE, CHLOROPLASTIC 1 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2780 Mtr-Chr3 41827241 41829993 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2780 K15744 - gmx:100793910 533.102