Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2778 ATGGAAGATGAGGGTGGTAGTTCGATGATGTTTCCAATGGAGAAGAGAGCTTTGGATTGTCTTGGTAAAGGTTTTGATCTAACAAGTGATTTTAGAATGAAATTTTCTAAGGGATTAATTAATGGTGGAAGATTAGTGGTAATTGATGAAATGAACAAGAGAGATATTATGGTACCAGGTGGTGTTACTATTAAAGATGTTTCAGAAGATATTCGTTGTGACAAAGGTGATCGTGTGAGGTTTAAATCTGATGTTCTTCAATTCAATCAGATGTCTGAAATGCTGAACCAGAAATCAGCCATACAAGGAAAAATTCCTTCTGGATATTTTAATGCTGTATTTGATCTAAGTGGTGATTGGTTTCGTGATGCTCAAGACATCAAATCTCTTGCTTTTGATGGTTACTTCATTTCTCTTTACAATTTACACTTAACTGCTTCACATCTAATACTGCAAGAGGAACTTAAAAAGTCTGTTCCAGCACACTGGGATCCAGCTTCATTGTCCAGGTTTATTGCGACATATGGTACACACATAATAGTAGGCATGGCTGTTGGAGGTCAAGATGTCATTTGTGTCAAACAAAAACATTCTTCAAAGGTTCCTCCTGGTGATCTCAGAAGACATTTGGAGGATTTAGGAGATTTTTTATTTTCAGATTTAAGAAGCCCTTCTCTACTAGAGAGGAAGACAACAACAACAGAAGCCAAACAAAAAGTCCCAGAGGTTTTTAATCGTGTCTTGCAATCAAGCACAATGCAGTTCACAAGTATTTCAGAAACATCAAGCAAAGATGGACTCACTATTATTTGCTCAAAAAGAGGAGGAGATGTGTTTAAGCACAGTCACTCGAGTTGGCTCCAAACAATGGCGTCTAATCCTGAAGCAATCCACTTCAAGTTTGTTCCTATTTCATCACTTCTCACAGGAATTCCTGGAAGTGGCTATCTTAGTCATGCAATCAATTTGTATTTAAGATATAAGCCTACTCCTGATGACTTACAATACTTCTTGGAGTTTCAAATTCCCAGGGAATGGGCACCTATGTTTTCTGAGCTACCTCTGAGACATCAAAGGAAAAAGACTTATTCTCCTCCACTACAATTTAGTTTCATGTCTCCAAAGCTTCATATCAACTCTACACAGGTAGTAAGTGAACAAAAACCGGTGGTTGGCCTCCGATTATACTTGGAGGGAAGGAAATGTGATAAACTTGCAATTCATATACATCATCTTTCAAGCCTCCCAAATACAATGACACTCTCTTCAAGCACCACGACTATGTGGCGAGGATCCGATGAGGACGAATCCAGCAACCAGTTTGCCGAACCAATAAGATGGAAGAAATTCGCGCATGTGTGCACCTCAGTGGTCAAGTATGACCCCAACTGGTTGCACGAATCAAATTCAAGCGGGGTTTATATCGTAACCGGTGCTCAACTCATCAGCAAAGGGAATTGGCCTAGGAATGTACTTCACCTGCGCCTTCTCTTCACTCACATACCAAATTGCAGCATCAGGAAAACAGAATGGGCTGCTGCACCAGAAGCTTCAAGAAAATCGACTTTCTTCACAAATCTGAGCACAACATTTTCATTCACACAACAAAGTGTTACTGCTACACAGAAACAGGCCCAACAGGCAGCTGCGGCAGCTGCAACTGCACTAAACTCTGGTGTTTATCCAAATGGTCCACCTGTGCCTGTTCGTTCTGCTAAGATGCTTAAATATGTGGAGACATGTGAGGTTTTGCGCGGCCCACATGATGCTCCCGGGCATTGGTTGGTTATTGCTGCTAAGCTTGTGACAGAGGGTGGCAAGGTTGGATTACAGGTCAAGTTTGCATTGTTAGATTACTAG 1860 0.4086 MEDEGGSSMMFPMEKRALDCLGKGFDLTSDFRMKFSKGLINGGRLVVIDEMNKRDIMVPGGVTIKDVSEDIRCDKGDRVRFKSDVLQFNQMSEMLNQKSAIQGKIPSGYFNAVFDLSGDWFRDAQDIKSLAFDGYFISLYNLHLTASHLILQEELKKSVPAHWDPASLSRFIATYGTHIIVGMAVGGQDVICVKQKHSSKVPPGDLRRHLEDLGDFLFSDLRSPSLLERKTTTTEAKQKVPEVFNRVLQSSTMQFTSISETSSKDGLTIICSKRGGDVFKHSHSSWLQTMASNPEAIHFKFVPISSLLTGIPGSGYLSHAINLYLRYKPTPDDLQYFLEFQIPREWAPMFSELPLRHQRKKTYSPPLQFSFMSPKLHINSTQVVSEQKPVVGLRLYLEGRKCDKLAIHIHHLSSLPNTMTLSSSTTTMWRGSDEDESSNQFAEPIRWKKFAHVCTSVVKYDPNWLHESNSSGVYIVTGAQLISKGNWPRNVLHLRLLFTHIPNCSIRKTEWAAAPEASRKSTFFTNLSTTFSFTQQSVTATQKQAQQAAAAAATALNSGVYPNGPPVPVRSAKMLKYVETCEVLRGPHDAPGHWLVIAAKLVTEGGKVGLQVKFALLDY* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2778 619 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 11 619 IPR044663 GO:0006952|GO:0012501|GO:2000031
Mtr3g2778 619 PANTHER OS02G0475300 PROTEIN 11 619 - -
Mtr3g2778 619 SMART MACPF_8 127 326 IPR020864 -
Mtr3g2778 619 Pfam MAC/Perforin domain 110 324 IPR020864 -
Mtr3g2778 619 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 4 338 IPR020864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2778 Mtr-Chr3 41812392 41815809 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2778 - - gmx:100781070 952.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2778 3 41812392 41815809 Mtr8g2822 8 38925119 38930995 PCT