Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2770 ATGTCGGAGATGGCGAACACAGATCCCGAGGGAATCGACGGAGTCCGTATGACATGGAACGTCTGGCCACGTAGCAAAGTAGAATCCTCCAAATGCGTTATCCCACTCGCCGCCACAATCTCCCTCATCCGTTCTCATCCCGATATCCCCAGTCTTCCTTATGCACCCCTCCGTTGCAAAACCTGCACCTCCATTCTCAACCCTTACTCCCGCGTTGATTTCACCGCTAAGATCTGGATCTGTCCATTTTGTTATCAACGTAACCATTTTCCACCTCATTACAACGCTATCTCTGAAACTAATCTCCCTGGTGAACTCTATCCTCAATACACCACCGTTGAATATCATATCCCTCATACCGATCCTAATCCTCCTCCTTCCCCTGTTTTTCTCTTTCTGCTTGATACTTGTATCATTGAAGAGGAGATTAATTATCTCAAATCGGCTCTTGGTAGAGCAATTGGGCTTTTGCCTGATAATGCTCTTGTTGGGTTTTTATCCTTTGGGACTCAGGTTCAGGTTCATGAATTGGGATTTTCTGATATGTCTAAAGTTTATGTTTTTCGAGGATCCAAAGAGATTTCTAAAGATCAAATTTTGGAACAATTGGGTCTTGCTTCTTCTAATTCTGCTGCTAGGAGACCGATTAAAGGTGGTCCAGGTGTTATTGGTGGTGGTGCTCCTTTTCCCAATTCCGGTGTTTCACGGTTTTTGTTGCCTGCTTCTGATTGTGAATATACTCTCAATGCGCTGTTGGAGGAATTGCAGAGAGATCAATGGCCAGTTCCACCTGGCAAACGACCTGCTCGTTGTACTGGAGTTGCATTGAGTGTTGCAGCTGGATTGCTTAGTGCTTGTAATCCTGGGACCGGGGCTAGAATTATAGCTTTGGTTGGAGGGCCATGCACTGAAGGACCTGGCACGATTGTGTCGAAAGAACTATCTGACCCAGTGCGTTCTCATAAAGATCTTGATAAAGATGCGGCACCTTACTTTAAGAAAGCAGTGAAGTTTTATGAGGGTCTTGCAAAACAGCTGGTTAGCCAGGGTCATGTTTTAGATCTTTTTGCATCAGCACTTGATCAGGTTGGAGTTGCAGAAATGAAAGTCGCAGTTGAAAGAACTGGTGGCCTTGTTGTCCTGTCTGAAAGTTTTGGTCATTCAGTCTTCAAGGACTCTTTTAAGCGTGTTTTTGAGGATGGGGAGCAATCTCTTGGTCTCTGTTTCAATGGAACCCTTGAGATAAATTGCTCAAAGGAAATCAAAATTCAGGGAATTGTTGGACCTTGCACATCGATGGAGAAGAAAGGACCTTCTGTTGCTGATACCGTCATAGGAGAGGGCAACACAACAATATGGAAGATGTGTGGTCTTGACAAGAGTACATGCTTGACTGTGATGTTTGATCTTTCATCAAGTGATCGTTCAAATACTCCAGGTGGTGTCAACCCACAACTGTACCTGCAGTTCCTTACAAGTTACCAGGGCCCAGATGGTCAATTAGTGCTTCGTGCGACAACAGTAACTAGAAGATGGGTAGATAGTGCTGTTAGTTCTGAGGAATTGGTTCAAGGATTTGACCAAGAAACTGCTGCAGTTGTAATGGCTAGATATGCTTCTCTGAAAATGGAGACAGAGGAAACATTTGATTGCACACGGTGGTTGGATAGGTTCCTCATTCGCCTCTGTTCTAAGTTTGGGGACTACCGCAAGGATGATCCATCATCTTTTACATTAAATCCATCATTTTCTCTTTTCCCCCAGTTTATGTTCAATCTGCGACGCTCACAGTTTGTACAGGTTTTTAACAACAGTCCAGATGAGACTGCATACTTTCGCATGTTGTTAAACCGGGAAAATATTAGTAATGCGGCTGTCATGATTCAGCCATCACTAATATCATATTCATTTAATTCACTGCCTGCACCAGCATTGTTGGATGTGGCTTCCATTGCTGCAGACCGGATTCTGTTGCTAGATTCATATTTTAGTGTGGTTATTTTTCATGGGATGACAATTGCTCAATGGCGCAACTTGGGATATCAGAACCAACCAGAACACCAGGCTTTTGCACAACTGTTACGAGCTCCACAAGATGATTCCCAAGCAATAATTAGAGATCGGTTTCCTGTTCCTAGATTGGTAGTGTGTGATCAACACGGTTCCCAGGCTAGATTTTTATTAGCAAAACTGAATCCGTCAGCAACATATAATAATGCGCACGAGATGGCTGCTGGTTCAGATGTAATCTTTACCGATGATGTTAGCCTTCAAGTTTTCTTTGAGCATCTGCAAAGGCTGGCTGTCCAATCTTGA 2316 0.4378 MSEMANTDPEGIDGVRMTWNVWPRSKVESSKCVIPLAATISLIRSHPDIPSLPYAPLRCKTCTSILNPYSRVDFTAKIWICPFCYQRNHFPPHYNAISETNLPGELYPQYTTVEYHIPHTDPNPPPSPVFLFLLDTCIIEEEINYLKSALGRAIGLLPDNALVGFLSFGTQVQVHELGFSDMSKVYVFRGSKEISKDQILEQLGLASSNSAARRPIKGGPGVIGGGAPFPNSGVSRFLLPASDCEYTLNALLEELQRDQWPVPPGKRPARCTGVALSVAAGLLSACNPGTGARIIALVGGPCTEGPGTIVSKELSDPVRSHKDLDKDAAPYFKKAVKFYEGLAKQLVSQGHVLDLFASALDQVGVAEMKVAVERTGGLVVLSESFGHSVFKDSFKRVFEDGEQSLGLCFNGTLEINCSKEIKIQGIVGPCTSMEKKGPSVADTVIGEGNTTIWKMCGLDKSTCLTVMFDLSSSDRSNTPGGVNPQLYLQFLTSYQGPDGQLVLRATTVTRRWVDSAVSSEELVQGFDQETAAVVMARYASLKMETEETFDCTRWLDRFLIRLCSKFGDYRKDDPSSFTLNPSFSLFPQFMFNLRRSQFVQVFNNSPDETAYFRMLLNRENISNAAVMIQPSLISYSFNSLPAPALLDVASIAADRILLLDSYFSVVIFHGMTIAQWRNLGYQNQPEHQAFAQLLRAPQDDSQAIIRDRFPVPRLVVCDQHGSQARFLLAKLNPSATYNNAHEMAAGSDVIFTDDVSLQVFFEHLQRLAVQS* 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2770 771 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 630 770 IPR036180 -
Mtr3g2770 771 SUPERFAMILY Zn-finger domain of Sec23/24 47 119 IPR036174 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Mtr3g2770 771 Gene3D Severin 629 733 IPR029006 -
Mtr3g2770 771 Gene3D Sec23/Sec24 helical domain 524 768 - -
Mtr3g2770 771 PANTHER PROTEIN TRANSPORT PROTEIN SEC23 1 770 IPR037364 -
Mtr3g2770 771 Pfam Sec23/Sec24 zinc finger 56 94 IPR006895 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Mtr3g2770 771 SUPERFAMILY Helical domain of Sec23/24 527 629 IPR036175 GO:0006886|GO:0006888|GO:0030127
Mtr3g2770 771 Gene3D - 10 510 - -
Mtr3g2770 771 Pfam Sec23/Sec24 beta-sandwich domain 409 513 IPR012990 -
Mtr3g2770 771 Pfam Sec23/Sec24 helical domain 527 623 IPR006900 GO:0006886|GO:0006888|GO:0030127
Mtr3g2770 771 SUPERFAMILY beta-sandwich domain of Sec23/24 8 526 - -
Mtr3g2770 771 Pfam Sec23/Sec24 trunk domain 125 398 IPR006896 GO:0006886|GO:0006888|GO:0030127
Mtr3g2770 771 PANTHER PROTEIN TRANSPORT PROTEIN SEC23 1 770 - -
Mtr3g2770 771 SUPERFAMILY vWA-like 128 399 IPR036465 -
Mtr3g2770 771 Pfam Gelsolin repeat 639 727 IPR007123 -
Mtr3g2770 771 CDD Sec23_C 619 739 IPR037550 GO:0030127|GO:0090114
Mtr3g2770 771 Gene3D - 53 112 - -
Mtr3g2770 771 Gene3D von Willebrand factor, type A domain 124 407 IPR036465 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2770 Mtr-Chr3 41711400 41717658 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2770 K14006 - gmx:100813940 1392.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2770 3 41711400 41717658 Mtr3g2770 3 41711400 41717658 ECH